Paenarthrobacter sp. GOM3: IRJ34_14400
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Entry
IRJ34_14400 CDS
T10366
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IRJ34_14400 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pago03019
]
IRJ34_14400 (groL)
03110 Chaperones and folding catalysts [BR:
pago03110
]
IRJ34_14400 (groL)
03029 Mitochondrial biogenesis [BR:
pago03029
]
IRJ34_14400 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pago04147
]
IRJ34_14400 (groL)
Enzymes [BR:
pago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IRJ34_14400 (groL)
Messenger RNA biogenesis [BR:
pago03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IRJ34_14400 (groL)
Chaperones and folding catalysts [BR:
pago03110
]
Heat shock proteins
HSP60 / Chaperonin
IRJ34_14400 (groL)
Mitochondrial biogenesis [BR:
pago03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IRJ34_14400 (groL)
Exosome [BR:
pago04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IRJ34_14400 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IRJ34_14400 (groL)
Exosomal proteins of breast cancer cells
IRJ34_14400 (groL)
Exosomal proteins of colorectal cancer cells
IRJ34_14400 (groL)
Exosomal proteins of bladder cancer cells
IRJ34_14400 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WOH17533
LinkDB
All DBs
Position
complement(3104747..3106360)
Genome browser
AA seq
537 aa
AA seq
DB search
MAKQLAFNDAARRSLEAGIDKLANTVKVTLGPRGRNVVLDKKWGAPTITNDGVTIAREVE
LDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVKEGLRNVAAGAAPGEIKRGIE
VSVETVAARLLENAREVEGTQVASVAAISAQSDEVGELLAEAFGKVGKDGVITIEESSTT
QTELVLTEGMQFDKGYLSPYFVTDAERQEAVLEDALILINQGKISSLQDFLPLLEKALQA
NKPLFIIAEDIEGEALSTLIVNRIRGTLNVVAVKAPGFGDRRKAMLQDIATLTGAQVVSP
DLGLTLDSVGLEVLGTARRITVTKDNTTIVDGAGLAQDVADRVAQLRAELTRTDSDWDKE
KLQERLAKLAGGIGVIKVGAATEVELKEKKHRIEDAVSSTRAALEEGIVSGGGSALIHAL
KALDESPAVKALEGDAAAAVGIVRRALVQPLRWIAQNAGFDGFVVVAKVSELEANHGFNA
KSGEYEDLIAAGVIDPVKVTRSALRNAASIAALVLTTETLVAEKPAEEEDAHAGHQH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagcttgcttttaacgatgctgcccgccggtctcttgaggccggtatcgac
aagctcgccaacactgtcaaggtgacgcttggtccgcgcggccgcaacgtcgtgctggac
aagaagtggggcgctcccacgatcaccaacgacggcgtcaccatcgcccgcgaagttgag
cttgacgacccctacgagaaccttggcgcacagctggccaaggaagtagccaccaagacc
aacgacgtcgccggcgacggcaccaccacggctaccgtgctggcacaggccctggtcaag
gaaggcctgcgcaacgttgcagccggcgccgctccgggcgagatcaagcgtggcattgag
gtttccgttgaaaccgtagccgcccgcctcctggagaacgcccgcgaagtcgaaggcacc
caggtcgccagcgttgctgccatctctgcacagagcgacgaggtcggcgagctgctggct
gaggcgttcggcaaggtgggcaaggacggtgtcatcaccattgaagagtcctccaccacg
cagaccgaactggtcctcaccgaaggcatgcagttcgacaagggctacctgtccccgtac
ttcgtcaccgacgcagagcgccaggaagccgtccttgaggacgccctcatcctgatcaac
cagggcaagatctcctcactgcaggacttcctgccgctcctggagaaggccctgcaggcc
aacaagccgctcttcatcattgctgaagacatcgaaggcgaagccctttccacgctgatc
gtcaaccgcatccgcggcacgctcaacgttgttgccgtcaaggcaccgggcttcggcgac
cgccgcaaggccatgctccaggacatcgccacgctcaccggcgcacaggttgtctccccg
gacctcggcctgaccctggactccgtcggcctcgaggtactcggtaccgcacgccgcatc
acggtcaccaaggacaacaccaccatcgtggacggcgcaggtttggcccaggacgtggcc
gaccgcgttgcacagctgcgtgccgagctcacccggacggactccgactgggacaaggaa
aagctgcaggaacgcctggccaagctcgccggcggcatcggcgtcatcaaggttggcgca
gccaccgaggtggagctgaaggaaaagaagcaccgcatcgaggacgccgtttcctccacg
cgtgcagcccttgaagaaggcatcgtttccggcggcggttccgcactcatccacgccctc
aaggcactggacgagtccccggccgtcaaggcactggaaggtgacgcggcagcagccgtt
ggcatcgtccgccgtgccctggtccagcccctgcgttggatcgcacagaacgccggcttc
gacggcttcgtggttgttgccaaggtttccgagctggaagccaaccacggcttcaacgcc
aagtccggcgagtacgaggacctgatcgccgctggcgtgatcgaccccgtcaaggtcacc
cgctccgcactccgcaacgccgcttccatcgctgccctggtcctcaccaccgagaccctg
gttgccgaaaagccggccgaggaagaagacgcacacgcaggtcaccagcactaa
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