Paenarthrobacter sp. GOM3: IRJ34_14610
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Entry
IRJ34_14610 CDS
T10366
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pago03016
]
IRJ34_14610
Enzymes [BR:
pago01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IRJ34_14610
Transfer RNA biogenesis [BR:
pago03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IRJ34_14610
Prokaryotic type
IRJ34_14610
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WOH17571
LinkDB
All DBs
Position
complement(3150371..3151261)
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AA seq
296 aa
AA seq
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MNERKPAAPVMGGGGFLRVRLDLSYDGGPFSGWALQPGLRTVQGSLEEALTLLLQRPVRV
TVAGRTDAGVHARGQVVHLDLTEAEWLSLPRGHELDPAVALLRRLRGALSRILGDLTGAV
EVHDAGLAPEGFDARFSALWRRYSYRIADGPERWDPVLRSITLWHKSAVDVSVMNHGVQA
LLGLQDFRSYCKPREGATTVRELQKFSFARGSDGVIVATVQADAFCHNMVRSLVGSALRV
GEGLESPGWLHARLLERKRDAKSVLAAPHPLVLEEVAYPSDGELLARAELTRARRE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgaaaacccgctgcccccgttatggggggcggcgggtttttgcgtgttcgg
ctggatctctcgtacgacggcggccctttcagcgggtgggcgctgcagcctggtcttcgc
acggtgcaggggtcgctggaggaagcactgacgctcctgttgcagcggcccgtccgcgtg
acggttgccggcaggactgacgccggggtccatgcccgtgggcaggtagttcacctggac
ctgacagaagccgagtggctgtcactgccgcgcgggcacgaactcgatcccgccgtcgcg
cttttgcgccgtctccgtggtgcgttgagccggattcttggcgacctgaccggcgctgtg
gaggtgcacgacgccggcctggcgcctgaaggtttcgacgcccgcttttctgcgttgtgg
cgaagatacagttaccggattgccgacggtccggaacggtgggacccggtccttcgaagc
attaccttgtggcacaagtccgctgtggatgtctccgtgatgaaccatggcgtgcaggca
ctgctgggactccaggattttaggtcctactgcaaaccccgcgaaggtgccacgacggtc
cgtgagctgcagaagttctcgtttgcgcgggggagcgacggcgtcatcgtggccacagtc
caggcggatgccttttgccacaacatggtgcggtcgttggtaggttctgcgctgcgtgtg
ggggagggtctggaatcgccgggctggctgcacgctcgattgttggaacggaagcgggat
gccaaatccgttcttgccgcaccccacccgctggtattggaggaagttgcgtacccgtcg
gatggcgagttgctggcgcgggctgaactgacgcgggcccgcagggagtaa
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