KEGG   Paenarthrobacter sp. GOM3: IRJ34_18595
Entry
IRJ34_18595       CDS       T10366                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pago  Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:pago00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pago03032]
    IRJ34_18595
   03036 Chromosome and associated proteins [BR:pago03036]
    IRJ34_18595
   03400 DNA repair and recombination proteins [BR:pago03400]
    IRJ34_18595
DNA replication proteins [BR:pago03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    IRJ34_18595
Chromosome and associated proteins [BR:pago03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    IRJ34_18595
DNA repair and recombination proteins [BR:pago03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      IRJ34_18595
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: WOH18339
LinkDB
Position
complement(4013652..4013939)
AA seq 95 aa
MAKNRSELVAEVAGKAGTSQAAVNSVLDALFEVFETSVAAGEKITIPGWLAVERTDRAAR
TGRNPQTGETIQIAAGHSVKLTAGSKLKAAVAKKK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctaagaaccgtagtgaactcgttgcagaggtagcaggcaaggctggcaccagccag
gcagcagtcaactccgtgctcgatgcactgttcgaagttttcgagacttctgtcgccgct
ggcgaaaagatcaccatcccgggctggctcgcagttgagcgcaccgaccgtgcagctcgc
accggccgcaacccgcagaccggcgaaaccatccagatcgcagccggccacagcgtcaag
ctgaccgcaggctccaagctgaaggctgctgtcgccaagaagaagtaa

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