Permianibacter aggregans: E2H98_03240
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Entry
E2H98_03240 CDS
T06332
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03030
DNA replication
pagr03430
Mismatch repair
pagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2H98_03240 (dnaE)
03430 Mismatch repair
E2H98_03240 (dnaE)
03440 Homologous recombination
E2H98_03240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagr03032
]
E2H98_03240 (dnaE)
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_03240 (dnaE)
Enzymes [BR:
pagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2H98_03240 (dnaE)
DNA replication proteins [BR:
pagr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2H98_03240 (dnaE)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2H98_03240 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QGX38723
LinkDB
All DBs
Position
complement(705815..709294)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDTGFVHLRVHSEFSMVDGLLRIGELIKASAGMGMPAIALTDQTNLCGLVKFYKKAQGA
GIKPIIGSDVWLRSERLGNQLFRAVLLAQNLKGYNHLTRLISRAFTEGQQRGVPVIDQQW
LFELNEGLIVLSGGREGDVGQLLLANDMASAAACLAAWKQHFPHRFYLEVQRTGRDNEEN
YLHKVVALADGSQTPVVATNDVRFLKESDFEAHEARVCIHQGRVVDDPRRPRDYSPQQYL
RSPEEMQALFADLPEALANTVEIAKRCSVPLTLGKYFLPEYPIPEGFTLAEFFAHTSREG
LKQRYRNIFPDGNIDPEKEKTYQERLEVEIGVISKMGFEGYFLIVADFIQWAKNNGVPVG
PGRGSGAGSLVAYSLGITDLDPLPYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
QKYGRESVSQIITFGTMAAKAVIRDVGRVLGHPYGMVDKIAKLIPNELDMSLEKAFEQEE
EIRKRYEAEEDVKALWDMAVKLEGLTRNAGKHAGGVVIAPSALTDFAPLYCDEAGQGLVV
QFDKDDIEQAGLVKFDFLGLKTLTVIDWAMEMVNDFRQKNGDAPLSIETIPLTDGKTFEL
LKAANTGAVFQLESTGMRKLIAKLKPSCFEDIIALVALYRPGPLESGMVDDFIKRKHGEE
PVSYPHPDYQHEWLQPVLAPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEE
MAKQRAIFQEGAKGLGIDDQLAAQIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKTHYP
APFFAATMSADMHNTDKIVGLIDDAEQNGIKIVPPDINRSVYKFTVADPRTVVYGIGAIK
GVGENAIAGMIDERNANGPFRDLFDFCARADLRKVNRRVIEALINSGALDHCGPSRAVML
ASLDEAMKAAEQAGRDRLSGQNDLFGGEPETRSPEPNWVKIHSESEEERLRLEKETLGLY
LTAHPIDRYLKELNHFCSARLSHVQPTRRGDNITVSGLLIGIRIMQNKSGARWAILTLDD
KSGRLEAKLFSELYEKHKHQLVEDKVIVLEGEVYEDEYLQRPSMTVRGLFDIAEARSRFA
RRLELVINGQQLPVGAIEKLVGTLRDFGPGTFPVLTEYQNGEAAVRVSLGEQCKVQPRDE
LLQRLRQFEGCQRAEVIYQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccggctttgtccatttgcgcgtgcattccgaattctcgatggtcgacggt
ttgctgcgcatcggggaattgatcaaagccagcgccggtatgggaatgcccgctatcgcg
ctgaccgatcaaaccaatctctgcgggctcgttaagttctacaaaaaagcccaaggtgct
ggcatcaaaccgattatcggcagcgatgtttggctgcgcagcgaacgcttgggcaatcag
ttgttccgcgcggtgttgctggcgcaaaacctgaaaggttacaaccatctgacgcgcctg
atctcgcgcgcgtttaccgagggccagcagcgtggcgtgccggtcatcgatcagcaatgg
ttgttcgagctgaatgaaggactgattgtgttgtccggcggtcgcgaaggtgatgtcggg
caattgctgctggccaatgacatggcctctgcagcggcttgtctggctgcctggaagcaa
cattttccacatcgcttctatctggaagtgcagcgtaccggccgtgataacgaagaaaat
tacctgcacaaggtcgtggcattggccgatggttcgcaaaccccagtggtggcaaccaat
gacgtgcgcttcttgaaagaaagcgatttcgaagcgcatgaagcgcgcgtctgtattcat
cagggccgtgttgtcgatgacccgcgccggccgcgcgattattcgccgcaacaatacttg
cgctcaccggaagaaatgcaggcgttgtttgccgacttgccggaagcgctggccaacacc
gtcgagattgccaaacgctgttcggtgccgttgacgctcggcaaatactttttgcccgag
tatccgattccggaaggcttcacgctggcggagtttttcgcccatacctcgcgcgaaggc
ttgaagcagcgttaccgaaatatttttcctgatggcaatatcgatccagaaaaagaaaag
acctatcaggaacgtcttgaagtcgaaattggcgtcattagcaagatgggcttcgaaggc
tacttcctgatcgttgcagactttatccagtgggcgaaaaacaacggcgtgccggtcggc
ccgggccggggttccggtgccggctcattggtcgcgtattcgcttggcattaccgatttg
gatccgctgccctatgacttgctgttcgagcgcttcctgaaccctgagcgggtatcgatg
ccggacttcgacgtcgacttctgcatggaaggtcgcgaccgcgttatcgattatgttgcg
cagaaatacggtcgcgaatcggtctcgcagatcatcacgttcggaacgatggcggcgaaa
gcggtgatccgcgatgtcggccgtgtgctcggtcatccttacggcatggtcgacaaaatc
gccaagctgattccgaacgagctcgatatgagcctggaaaaagccttcgagcaggaagag
gaaatccgcaagcgctacgaagccgaagaagacgtcaaagcgctctgggacatggcggtc
aaactcgaagggctgacccgtaacgccggcaagcacgccggtggagtggtgattgcgcca
agtgcattgaccgattttgcgccgctttattgcgacgaggccggccaaggtttggtcgtg
caattcgacaaggatgatatcgaacaagcgggcctcgtcaaattcgactttctcggtttg
aaaaccctgacggtgatcgattgggccatggaaatggtcaatgattttcggcagaaaaac
ggcgacgcaccgctgtcaatcgaaaccattccattaaccgacggcaaaacctttgagtta
ctgaaagcggccaataccggcgcggtattccagctggaatcgaccggtatgcgcaagctg
atcgccaagctgaaaccgagttgttttgaagacatcatcgcgttggtggcgctttatcgt
ccgggtccgttggaatcgggcatggttgacgacttcatcaaacgtaagcacggcgaagag
ccggtttcctatccgcatccggattatcagcacgaatggttgcagccggtgctggcacca
acttacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtgctggctggt
tattcgctcggcggcgccgacttgttgcgtcgggcgatgggtaaaaagaaaccggaagaa
atggccaagcagcgcgccatttttcaggaaggcgcaaaaggcctgggcatcgacgatcag
ctcgccgcgcaaattttcgatttgatggaaaaatttgccggctacggtttcaacaaatcg
cactcggctgcctacgcgctggtttcctatcaaacggcttggctgaaaacgcattaccca
gcgccgtttttcgccgcgacgatgtcggctgatatgcacaacaccgacaagattgtcggt
ttgatcgatgatgccgaacaaaacggcatcaagattgtgccgccagatatcaatcggtcc
gtttacaagttcaccgttgccgatccacgcaccgtcgtctacggcattggcgcgattaaa
ggggttggtgaaaacgccattgccggcatgatcgatgagcgtaatgccaatggtccattc
cgtgatttgtttgatttctgtgctcgcgccgatttacgcaaggtcaatcgccgggtgatc
gaagcgctgatcaattccggtgcgctcgatcactgtggcccaagccgggccgtgatgctg
gcttcgcttgatgaagcgatgaaagccgcggaacaagccggtcgcgatcgcctgagcggt
cagaatgatttattcggcggcgagccggaaacgcgcagtccggaaccaaactgggtgaaa
atccacagcgaaagcgaagaagaacggctgcggctggaaaaagaaacgctgggtttgtat
ctgaccgcgcatccgatcgatcgctacctgaaagagctgaatcatttttgttcggctcga
ctttcgcatgtgcaaccaactcggcgtggcgacaacatcaccgtttcgggtttgctgatt
ggcatacgcatcatgcaaaacaaatccggtgcacgctgggcgattctgacgcttgatgac
aaaagtggtcggctggaagccaagctgttctccgagctgtacgaaaagcacaaacaccaa
ttggtcgaagacaaggtcatcgtgctagaaggcgaagtctacgaggacgaatacttacag
cgcccatcgatgaccgtgcgtggcttgttcgatatcgccgaagctcgctcgcgctttgcc
cgccgcttggagctggtaatcaacggtcagcaactgccagtcggcgccattgaaaaactc
gttggcaccttgcgtgattttggccccggcacctttccggtgctgaccgaataccagaac
ggcgaagcggccgtgcgggtgtcgctcggcgagcaatgcaaggtgcagccacgcgatgag
ctgctacagcggctgcgccagtttgaaggctgccagcgcgcggaagtcatttatcaataa
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