Permianibacter aggregans: E2H98_03925
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Entry
E2H98_03925 CDS
T06332
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pagr
Permianibacter aggregans
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pagr01011
]
E2H98_03925
Enzymes [BR:
pagr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E2H98_03925
Peptidoglycan biosynthesis and degradation proteins [BR:
pagr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E2H98_03925
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
DUF3071
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QGX38854
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Position
849291..850910
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AA seq
539 aa
AA seq
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MRWGIIAASCWFVLAGCQSLSPEATPAKPVTPVASTAPEAAPENAATPVAEPTKVAAETT
PVTEPEPITNIWLRIQQGLHLPDVDNEKVRVQRDWYIRNQAYMDRVAERADWYLFHIVES
LEAAGMPLDLALLPIVESAYQPYAYSRSRAAGMWQFIPSTGRLYGLPINWWQDGRRDVVR
STDAAIRYLKRLNQMFDGDWLLAMAAYNGGEGTILRAMEKNRKKGLPTDFWSLNLRTETS
AYVPKMIALSQLLREPEKYGFNWKPVQNEVRFARVAVGSQIDLKLAAELAGISADTLYQL
NPHYVRWATDPEGPHDLLVPVEKAEQFQFALQSLPVEKRVQWGVYTVKSGDTLGGIASKH
KTSVAQLRSTNNLKGNLINIGQTLLIPRQGGQPNKDTRLAAESSSPRPAANGVHTVREGE
NLWSIARANGLSVNQLRMLNQLAESDLLRPGQLLKVHSNARLASAASKRSKEEIQLAANP
HLSVKKIQYTVRNGDSLSRIADKFSVSDLSKWNRWDKNKVLRPGQKLTVYVDQANLSGG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggggaattattgccgcctcctgttggtttgtgttggcgggatgccaaagcctt
agccctgaagcaacgcctgccaagcccgtcacgccagtcgccagtacagcaccggaagcc
gcccccgaaaacgccgcgacaccggttgcagagccgaccaaggtcgctgctgaaaccacc
ccagtcaccgagccggaaccgatcaccaatatctggctgcgcatccagcaaggtttgcat
ctgccggatgtcgacaatgaaaaagtccgggttcagcgcgactggtatatccgtaaccag
gcctatatggaccgcgttgccgaacgggccgactggtacctgttccacattgttgaaagc
ctggaagcggctggcatgccgctcgatttggcgctgctgccgattgtcgaaagcgcttat
cagccttatgcctattcgcgcagtcgcgccgccggcatgtggcagttcatcccgtcgacg
ggtcgactttacggcctgccgatcaactggtggcaagacggccgtcgcgatgtcgtgcgc
tcgaccgacgccgccattcgttatttgaaacgtctgaatcaaatgtttgacggcgattgg
ctgttggcgatggcggcctacaatggtggcgaaggcacgattctgcgggcgatggaaaag
aaccggaaaaaaggcctgccaaccgacttctggtcgttgaatctgcgcaccgaaaccagt
gcctatgtgccgaaaatgatcgcgctgtcgcaactgctgcgcgagccggaaaaatacgga
ttcaactggaaaccggtgcagaatgaagtgcgttttgcccgtgttgccgttggctcacaa
atcgatttgaaactggcggcggaactcgccggcatttccgccgacacgctttatcagctg
aatccacactacgtgcgctgggccaccgatccggaaggtccgcatgatttgttggtgccg
gtcgaaaaagccgagcagttccagtttgcactgcaaagtctgccggtggaaaaacgcgtg
caatggggtgtttacacggtgaaaagtggcgacacgctaggcggcattgccagcaaacac
aaaaccagtgtcgcccagctgcgctcgaccaataacctgaaaggcaatttgatcaatatc
ggccaaaccctgctgatcccgcgtcaaggtggccagccaaataaagatacacgccttgcc
gccgaaagcagcagcccgcgtcctgccgccaacggtgtgcacacggtacgtgaaggtgaa
aacctgtggtcgattgcgcgcgccaatggtttgtcggtcaatcagttgcggatgctgaac
caactggccgaaagcgatttactgaggcctgggcaactgctgaaagtacatagcaacgcc
agactggccagcgccgcatcgaaacgtagcaaagaagaaatacaactggccgccaatccc
catctgtcggtcaagaaaatccagtacaccgtgcgtaacggcgattcgctgtcgcgcatt
gctgacaagttcagcgtcagtgacttgagcaaatggaatcgctgggacaagaataaggta
ttgcgcccaggccagaagctgaccgtctatgtggatcaagcgaatctgtctggcggttaa
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