Permianibacter aggregans: E2H98_05705
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Entry
E2H98_05705 CDS
T06332
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2H98_05705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagr03019
]
E2H98_05705 (recQ)
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_05705 (recQ)
Enzymes [BR:
pagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2H98_05705 (recQ)
Messenger RNA biogenesis [BR:
pagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2H98_05705 (recQ)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2H98_05705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
DUF6400
Motif
Other DBs
NCBI-ProteinID:
QGX39184
LinkDB
All DBs
Position
complement(1242673..1244496)
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AA seq
607 aa
AA seq
DB search
MQQAPLDILRQVFGYQQFRGEQAAIIDSVCAGHDTLVLMPTGGGKSLCYQIPALVRDGIA
IIISPLIALMQDQVAALREYGVAAAMLNSGLSSEAQRDIEQQLRAGQLKLLYVAPERLLL
PRTLELLQSLQQRHGLALFAIDEAHCVSAWGHDFRPEYLQLSVLAEQFPQVPRIALTATA
DARTRHDIEQRLALINANIFIAGFDRPNIRYQIQLKQQARQQLLGFLRREQQGQSGIVYC
LSRNKVEETASWLREQGFHALAYHAGLSAELRAQNQHAFLHDDNVIMVATVAFGMGIDKP
DVRFVAHLDMPRSIEAYYQETGRAGRDGLPAVAWMVYGLQDAITLQKMLGQSEADEQQKR
IEKNRLETMLGLCETTQCRRQVLLNYFDGEQHPRCGNCDNCLEPPQTFDGTTLAQKALSC
IYRTGQRFGVGYLIDVLRGADNDRIKQWQHEQLSVFGIGGDTPVAQWQSVFRQLISRGLV
LVDHERYGALRLHETARPVLRGEQTLMLRTEQTTAEKRAAKAKARSKHFIDSADQPLWEA
LRAKRRELADEHDVPPYVIFHDATLLAMLERKPQSMREMAEISGIGQHKLESYGEAFLEV
IWEFDQA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcgcctctggatatcttgcgtcaggtattcggctatcaacaatttcgtggt
gaacaggcggcgatcatcgactcggtttgcgccggtcacgatacgctggtgctgatgccg
accggcggcggtaaatcgctgtgctaccaaataccggcactggtacgcgatggtattgcc
atcatcatttcgccgctgattgccttgatgcaggatcaggtcgcggcgttgcgcgaatac
ggggttgccgccgcgatgctcaattccggcttgagcagcgaagcgcaacgcgacatcgag
cagcaactgcgcgcaggccaattgaaattgctatacgtcgctccagaacgtttgttgttg
ccacgcacgctggagctgctgcagtccttgcagcaacgccatggcttggccttgtttgcc
attgatgaagcgcactgcgtttctgcctggggccatgatttccggccggaatatctgcag
ctgtcggtgctggccgaacaatttccacaggtgccgcgtatcgcgttgaccgctacggcg
gatgcgcgcactcgacacgatattgagcagcgcctagcgctgatcaacgccaacattttt
atcgccggtttcgatcgaccgaacatccgttatcagattcaactgaaacaacaggcgcgg
caacaattgcttggttttctgcgtcgtgagcaacagggccaatcgggcattgtctattgc
ctgtcgcgcaataaagtcgaagaaaccgccagttggttacgagaacaaggctttcatgcg
ctcgcttatcacgctggcttgagcgccgagctgcgagcccagaatcagcacgcgtttttg
catgacgataacgtgatcatggtcgccaccgtggcgttcggtatgggtatcgacaaaccc
gatgtgcgtttcgtcgcccatctcgatatgccgcgcagcatcgaagcgtattatcaggaa
accggacgcgctggccgtgatggtttgccagcggtagcctggatggtgtatggcctgcaa
gatgccatcacgctgcaaaaaatgctcggccaatccgaagccgacgaacagcaaaaacgg
atcgagaaaaaccgtttggaaacgatgcttgggctgtgcgaaacaacgcagtgccgacgc
caggtgttgctgaattattttgacggcgagcagcacccacgatgtggcaattgcgataac
tgcctggagccgccgcaaacctttgatggcacgacactggcgcaaaaagcgctgtcctgt
atttaccgtaccggtcaacgtttcggtgtcggttatctgattgatgtgctgcgcggcgct
gacaatgatcgcatcaagcaatggcagcacgagcagctgtcggtgtttggcattggcggc
gatacgccggtggcgcaatggcaatcggtattccggcaattgatcagtcgcggtttggtg
ctggtcgatcacgaacgttatggcgcgctgcgcttgcatgaaaccgcccggccggtattg
cgcggcgaacagacgctgatgttgcgtactgaacaaaccactgcggagaagcgggcggca
aaggccaaagcccgcagcaagcattttatcgacagcgccgatcaaccattgtgggaagca
ttgcgcgccaagcgccgcgagctggctgacgaacacgatgtgccgccgtacgtgattttc
cacgatgcaacgctgctggcgatgctcgagcgcaagccgcaatcgatgcgggaaatggct
gaaatcagcggtattggccagcataaactggaaagctatggcgaagcgtttctcgaggtg
atctgggaattcgatcaggcttga
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