Permianibacter aggregans: E2H98_06350
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Entry
E2H98_06350 CDS
T06332
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr00550
Peptidoglycan biosynthesis
pagr01100
Metabolic pathways
pagr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2H98_06350 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2H98_06350 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pagr01011
]
E2H98_06350 (mrdA)
Enzymes [BR:
pagr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E2H98_06350 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pagr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E2H98_06350 (mrdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Pox_I6
Motif
Other DBs
NCBI-ProteinID:
QGX39298
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Position
complement(1379862..1381703)
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AA seq
613 aa
AA seq
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MKDPVTEGGLFYRRALMAGAVVLILFLALVGRLFYLQVLSYEEYVAKADRNRISTIPLAP
TRGLIYDRNGVVLAENRTSFSLEVMLEKTRDVDALIEELSSVITISDDDRERFAQERRQR
RKGRAIPIRTRLSEKEVAQFSVNQHRFPAVSLRGQLIRHYPFGEQFVHAIGYVGRINDRE
WEKLDQANYAATSHIGKVGLERFYEQVLHGAVGYQEIETDVHDRLVRVLNRVAPIDGKDL
HLHLDSELQFAALSMLGEQRGVIVAIDPNDGGVLALVSAPGFDPNPFVTGIDSLSYRALN
ESPDAPMFNRAINGVYPPGSTVKPHLALAGLMSGVTQPSRKVWDPGWYQLPGDERKYRDF
NWHLGGHGWVDLHTSIIISCDTYFYDMANRMGIDVLHDYMQRFGFGQKTGLDVYEEASGL
LPSSEWKRRARKQAWYPGETLSVGIGQGYWNATSLQLVSSTAALANGGKRYQLQLVDALG
VMDNRQDLPAQLAEHQLNAIPPEHLKLVRDAMKDVVHGARGTARKAFTGIDYLAAGKTGT
AQVASYAQDAKYDATKVEERFRDNALFVGYAPYDKPKIAVIVLVENVMGGGGSNAAPLAR
RVIDAYLEKNGRD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatccggtgaccgaaggcggattgttttatcgacgcgcgctgatggccggcgct
gtggtgctgatcctgtttctggcgctggtcgggcgcttgttctatctgcaagtcctgagc
tacgaagaatacgtcgccaaagccgatcgcaatcgcatcagcaccatacccttggcaccg
acccgcggcctgatttacgaccgcaatggcgtcgtgctcgccgaaaatcgcaccagcttc
agcctggaagtgatgctggaaaaaacccgcgatgtcgatgcgctgattgaggagttgagc
agcgtcatcaccatcagcgatgatgatcgggaacgtttcgctcaggaacgacgccagcgt
cgcaaaggccgggcgattccaattcgcactcgattgagtgaaaaagaagtcgcacaattc
tcggtcaaccagcaccggtttccggccgtcagtttgcgcggccagttgattcggcactac
ccattcggtgagcaattcgtacatgccattggctatgttggccgcatcaatgatcgcgaa
tgggaaaaacttgatcaggccaattatgcggccacttcccatatcggtaaggtcgggctc
gaacgtttctatgagcaggtgttgcacggcgcggtcggttatcaggaaatcgaaaccgac
gttcacgatcggctggtacgcgtgctgaatcgtgtcgcgccgatcgatggcaaagatctg
catttgcatctggatagcgagttgcagtttgccgcgttgtcgatgcttggcgagcaacgc
ggcgttatcgtcgcgatcgatccgaacgacggcggtgtattggcgctggtcagcgcgccg
ggttttgatccgaatccgttcgtcaccggtatcgattcactttcttatcgcgccctgaat
gaatcgcccgatgcgccaatgttcaatcgcgccatcaacggtgtttatccgccgggttca
accgtcaaaccgcatctggccttggctggtttgatgtctggtgtcacccaaccttcacgc
aaagtctgggacccgggctggtatcagctgcctggcgatgaacgaaaataccgcgacttc
aactggcatctcggtggccacggctgggtcgatttacacacgtcgatcatcatctcctgc
gacacttacttttacgacatggccaatcgtatgggcattgatgtgttgcacgactatatg
cagcgttttggtttcggccagaaaaccggacttgatgtttatgaagaagccagcggtctg
ttgccgtccagtgaatggaagcgaagggcacgaaaacaagcctggtatcccggtgaaacc
ttgagtgtggggatcggtcagggctattggaacgcaacgtcgctacaactggtcagctca
acggccgcattggcgaacggcggcaagcgttaccaactgcaactggtcgatgcgctcggc
gtcatggataaccgtcaggatttgccggcacaactggccgaacatcagttgaatgccatt
ccgccggaacatctgaaactggtgcgcgatgcaatgaaagacgtggttcacggcgcgcgc
ggtacggcacgcaaagcattcaccggtattgattacctggcggctggaaaaaccggtacg
gcacaggttgcctcctatgcgcaggacgccaaatatgatgccaccaaagtcgaagaacgg
tttcgcgacaacgccttgtttgtcggctacgcgccttacgacaaaccgaaaattgccgtt
atcgtgctggtcgaaaacgtcatgggcggcggcggttccaatgctgcacctctggctcgt
cgtgtgatcgatgcttacctggagaaaaacggccgtgactga
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