Permianibacter aggregans: E2H98_07950
Help
Entry
E2H98_07950 CDS
T06332
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2H98_07950 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagr03019
]
E2H98_07950 (rhlB)
Enzymes [BR:
pagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2H98_07950 (rhlB)
Messenger RNA biogenesis [BR:
pagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2H98_07950 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGX39587
LinkDB
All DBs
Position
1726090..1727370
Genome browser
AA seq
426 aa
AA seq
DB search
MSTHLTDIRFTDMGLHPNLIKALNELGYQQCTPIQAQTLPLLMQGKDIAGQAQTGTGKTA
AFLLAAFHDLLTLPEIEGRRPNEPRVLIMAPTRELAIQIYNDGLKLAKHTGLKLAVVYGG
AGYEEQRRNIEQGVDVLIGTTGRLIDYYKQGCYGLEAIDVVILDEADRMFDLGFIADIRY
LLRKMPPPHDRLNMLFSATFSQRVLELAYEHMNDAEHIRVEPDQMTAGKIRERMFLPSYE
ERIPLLLGLFDTLKPERAIVFLNTRHGSEDVWAHLAAYGLNAGLLTGDVPQKKRIALLEQ
LKAGELAVLVCTDVAARGLHIEGVSHVFNVDLPDDAEDYVHRIGRTARAGREGDAISFAS
EKTAMNLPAIEDYIGHKIPVEPITPDLLREPVSPKHMIPRSPAHREQRAHRRNTGGGGQR
RGPRRR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacatctaaccgatatacgtttcactgatatggggctgcaccccaatctaatc
aaggcattgaacgaactgggttaccagcaatgcacacccatccaagcacaaacgctgccg
ctgctgatgcagggcaaagacatcgccggccaggcccagaccggcaccggcaaaacggcg
gcgtttctgctggcggcgtttcatgacctgctgacgctgccggaaatcgaaggccgccgc
ccgaacgaaccacgcgtgttaatcatggctcctacgcgtgaactggcgattcagatttat
aacgacggtttgaaactcgccaaacacacgggtctgaaactcgctgtggtgtacggtggc
gccggttatgaagaacagcggcgcaacatcgagcaaggcgtcgatgtcttgatcggcacc
actggtcgcttgatcgattattacaaacagggttgctacggtttagaggccatcgacgtt
gtcattctcgacgaagccgaccgcatgttcgacctgggtttcatcgccgacatccgttac
ctgctgcgcaaaatgccaccgccgcacgatcgcctgaacatgctgttctcagcgacgttc
tcacagcgcgtgctggaacttgcctacgagcacatgaatgacgccgaacatatccgcgtc
gagccggaccaaatgaccgccggcaaaattcgcgagcgtatgttcttgccatcctacgaa
gaacgcattccgttgttgcttggtttgttcgacacgctgaaacccgagcgcgcgattgta
ttcctgaatacccgtcacggcagcgaagacgtctgggcgcatttggccgcttatggtttg
aatgctggcttgctgaccggcgacgtgccgcagaaaaaacgcatcgcgttgctggagcaa
ttgaaagctggcgaactcgccgtgctggtctgcaccgatgtagccgctcgcggtttgcat
atcgaaggcgtcagccacgtcttcaacgtcgatctgcccgatgatgccgaagattacgtg
catcgcattggccgtaccgctcgcgccggcagagaaggtgatgccatcagttttgcttcg
gagaaaacggcaatgaacctgccggcgattgaagactacatcggccacaaaattccggtt
gagccgatcacgccggatctgctgcgagaacccgtttcaccaaagcacatgattccacgc
agcccggctcatcgcgaacaacgcgcgcatcgccgtaacaccggtggcggtggtcagcgg
cgcggtccacgtcgtcgttaa
DBGET
integrated database retrieval system
