Permianibacter aggregans: E2H98_09880
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Entry
E2H98_09880 CDS
T06332
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03030
DNA replication
pagr03410
Base excision repair
pagr03420
Nucleotide excision repair
pagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2H98_09880 (polA)
03410 Base excision repair
E2H98_09880 (polA)
03420 Nucleotide excision repair
E2H98_09880 (polA)
03440 Homologous recombination
E2H98_09880 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagr03032
]
E2H98_09880 (polA)
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_09880 (polA)
Enzymes [BR:
pagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2H98_09880 (polA)
DNA replication proteins [BR:
pagr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2H98_09880 (polA)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2H98_09880 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2H98_09880 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
DNApol_Exo
DUF6027
Motif
Other DBs
NCBI-ProteinID:
QGX39952
LinkDB
All DBs
Position
complement(2238451..2241168)
Genome browser
AA seq
905 aa
AA seq
DB search
MTSQTKPIILVDGSSYLFRAFHALPALTNSKGQPTGAAYGVVAMLKKLLNTYQPEHIAVV
FDAKGPTFRNDIYPEYKANRPPMPDDLRSQIKPLHALIEALGLPILCIEGVEADDVIGTL
ARHASKDKRPVMISTSDKDMAQLVDDYVFLSNSMTDTTMQRDGVIEKFGVPPELIIDYLT
LMGDTVDNIPGVNGVGPKTAAKWLNEFGSLDDVIARADEVKGKAGEKLRDAIPQLPMSRE
LATIKCDVDLNFDYDELKPKKPNQEKLRELYSELEFKTWLKETLSNDEAQATATETVAPS
GIDRSQYETILEEADLDRWIDWLNKAKLFAYDSETTSLDELQAEIVGVSFALDDGRACYI
PVAHDYLGAPKQLDRDTVLKKLKPVLENGQKKIIGHNLKYDLKVLANYDIHLTGIASDTM
LESYVLDATGNRHDMDTLALKLLGHQNISFTDIAGKGKGQLTFNQIELEQASPYAAEDAD
VTFKLHQNQWPRLEKEPKLKSLLTELEIPVLSVLAKMELNGVLLDANKLREQSGQIAKRI
VELEHDAYELAGKEFNLASTKQLGEILFDEMKLPVIAKTPKGAPSTNEEVLEELALDYPL
PKLILEHRGLSKLKNTYTDKLPEQINERTGRVHTSFHQAGTSTGRLSSSDPNLQNIPIRT
EEGRRIRQAFIAPKDHVLLAADYSQIELRIMAHLSNDPGLLKAFQSGQDVHRATAAEIFE
VHPDEVTADQRRKAKAINFGLIYGMSAFGLARQIDVDRGAAQMYMHRYFARYPGVEQYMN
DIRQKATETGYVETLFGRRLYLPELKASNQARRKAAERIAINAPMQGTGADIVKRAMLAV
DAWLSKSNKPAKLILQVHDELVLEVQKDAIDEVKANVVQLMSSAAELSVPLVVDAGVGNN
WDEAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccaaaccaagccaataattctcgtcgacggttcctcttatctgtttcgcgcc
tttcatgccctgccggcgttgaccaacagcaaaggccaaccgaccggcgcggcctatggc
gtggtggcgatgctgaaaaaactgctgaatacctaccagccggaacatatcgccgtggta
ttcgacgccaagggtccaacctttcgtaacgacatttacccggaatacaaagccaaccga
ccgccaatgccggatgatctgcgcagccagatcaaacccttgcacgcgctgatcgaagcg
ctcggtttgccgattctgtgcattgaaggggtcgaagccgatgacgtcatcggcacgctg
gctcgccatgcctcaaaagataaacggccggtgatgatctcgacctccgacaaggacatg
gcgcaactggtcgatgattacgtgtttctgtcgaactcgatgaccgacacgacaatgcag
cgcgatggcgttatcgaaaaattcggtgtgccgccggaactcatcatcgactacctgacg
ctgatgggtgacaccgttgacaacattcccggcgtcaacggcgtcggcccgaaaaccgcc
gcgaaatggctgaacgaatttggttcgctcgatgacgtgattgcccgtgctgacgaagtc
aaaggcaaggccggtgagaaactgcgcgacgccattccgcagctaccgatgtcacgcgag
ctggcgacgatcaaatgcgatgtcgatttgaatttcgattacgacgaactgaaaccaaaa
aaacccaatcaggaaaagctgcgtgagttgtacagcgagctggaattcaaaacctggctg
aaagaaacgctgagcaacgatgaagcccaagcgacggcaaccgaaaccgtggcgccttcc
ggtattgaccgcagccagtatgaaacaatactcgaggaggccgatcttgatcgctggatt
gattggctaaacaaggccaagctgttcgcctatgatagcgagactaccagccttgacgaa
ttgcaagcggaaatcgttggcgtctcttttgcgttggacgatggacgcgcctgttatatt
ccggtcgcccatgactatcttggcgcaccaaagcagcttgatcgcgataccgtgctgaaa
aagttgaaaccggtattggaaaacggtcagaagaaaatcattggccataatctgaaatac
gatttgaaagtgctggccaactacgacattcacctgaccggcattgccagcgatacgatg
ctggaaagctatgtgctggatgccaccggcaaccgacacgacatggatacgctggcgctg
aaactgctcggtcatcagaatatttcctttaccgatatcgccggtaaaggcaaaggccag
ttgaccttcaatcaaattgaattggagcaggcatcgccgtatgccgcagaggatgccgat
gtcaccttcaaactgcaccaaaaccaatggccacgactggaaaaagagccgaagctgaaa
tcgttgctgaccgagctggaaattccggtgttgtcggtgttggcgaaaatggaattgaat
ggcgtcctgctcgacgctaacaagctgcgcgaacaaagcggccagatcgccaagcgtatt
gttgaactggaacacgacgcttacgaattggccggtaaggaattcaatctggcttcgact
aagcagctcggagaaattctgttcgatgaaatgaagctgccagtcattgccaaaaccccg
aaaggcgcgccatcgaccaatgaagaagtgttggaagagctggccctcgattatccactg
cctaagctgattcttgaacatcgcggcttgagcaaactgaaaaacacctacaccgataag
ctaccagaacagatcaatgagcggaccggtcgagttcatacttcgttccatcaggctggc
accagcactggacgactatcatcttccgatccgaatttgcagaacattccgattcgcact
gaagaaggccgacgcattcgccaggcctttatcgcaccaaaagatcatgtgttgctggcc
gccgactattcgcagatcgagttgcgcatcatggcgcatctatcgaatgacccgggtttg
ttgaaagccttccaaagcggccaggatgtacaccgtgcgacggcagcggaaattttcgaa
gtgcatccggatgaagtgacagccgatcaacgtcggaaagcaaaagcgatcaatttcggt
ttgatttacggcatgtcggcgtttggcctcgccaggcaaatcgatgtcgatcgcggcgcg
gcacaaatgtatatgcaccgctatttcgctcgctatcctggcgtcgagcaatacatgaat
gatattcgtcagaaagccaccgaaaccggttatgtcgaaaccctgtttggtcggcgcctg
tacctgccggaactgaaagccagcaatcaagcgcgacgcaaagccgccgaacgcatcgcg
attaacgcaccgatgcaaggcaccggtgcggatatcgtcaagcgcgcgatgctggccgtc
gatgcctggctcagcaaatcaaacaagccggcgaagctgattctgcaagtgcacgatgaa
ctggtgttggaagtgcagaaagacgctattgatgaagtgaaggcaaatgtcgttcagttg
atgagttcggcggcagaactgtcagtgccactggtggttgatgccggtgtcggcaacaac
tgggatgaagcgcattaa
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