Permianibacter aggregans: E2H98_09940
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Entry
E2H98_09940 CDS
T06332
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03420
Nucleotide excision repair
pagr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2H98_09940 (uvrD)
03430 Mismatch repair
E2H98_09940 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_09940 (uvrD)
Enzymes [BR:
pagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2H98_09940 (uvrD)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2H98_09940 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E2H98_09940 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
PAH
Motif
Other DBs
NCBI-ProteinID:
QGX39964
LinkDB
All DBs
Position
complement(2254333..2256489)
Genome browser
AA seq
718 aa
AA seq
DB search
MNTSLIDSLNPAQREAVTATDKALLVLAGAGSGKTRVLVHRIAYMATELGLSPYAMMAVT
FTNKAAAEMRHRIEALLGGPAAGMWIGTFHGLCHRFLRAHWHDAGLPENFQVLDSDDQQR
LIKRAIRALNLDENQWPPKQAQWWINGQKDEGLRPEDIRHQGDLFVATQLKIYQAYEEIC
RVAGAIDFAELLLRVVELFKKKPALLAHYQTRFNHILVDEFQDTNGIQYQFVKLLAGPHT
DITAVGDDDQSIYGWRGARVENLNTFLKDFKQSRIIRLEQNYRSTATILAAANAVIDHNT
GRLGKELWTEGNKGEAIAMYSAFNEQEEARFIAEKIEQWVDSGKDYSSIAILYRSNAQSR
VLEEALLQRRIPYRIYGGLRFFERQEIKDALAYLRLTFNRDDDAAFERVVNTPTRGIGEK
TVETLRERARLHQMSLWKATQLLVNEKGLPARALAALQGFMQLVITLDSSTNEVPLHEQM
RTVIHESGLAAMYAAERGEKALARKENLEELINAAREFEPDEEVEDLSPLAGFLTHAALE
AGETQASEFNDAVQMMTLHSAKGLEFPLVFIAGMEEGLFPHSMSMEEPGRLEEERRLCYV
GITRAKEKLFLTRAEKRRMWGRESYSDWSRFVDEIPSELLQEIRLGGKLTTPVYQRSHSS
ASLPNYPFKVGSDVEHSAFGIGTVLGYEGDGPQMRVQVNFTGAGCKWLVLAYAKLNAV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttccctgattgattccctgaatccggcccagcgcgaggcggtgactgccacc
gacaaagcgttgctggtgctggctggtgccggcagcggcaagacccgcgtgctggtgcat
cgtattgcctatatggcaactgaacttggcttgtcaccgtacgcgatgatggccgtgacc
tttaccaataaagccgcagcggaaatgcgccaccgtatcgaagcgctgctcggcggaccc
gcggccggcatgtggatcggcacgtttcacggactttgccaccgcttcttgcgcgcgcac
tggcatgacgccggattaccggaaaatttccaagtgctcgattccgacgatcaacagcgc
ttgataaaacgagcgatacgggcactgaatcttgatgagaaccagtggccgccaaaacag
gcgcagtggtggattaatggtcagaaagacgaaggtctgcgcccggaagatatccgccat
caaggtgatttgtttgtcgcgacccagctgaagatttatcaggcctacgaagaaatttgc
cgggtagcgggcgctatcgatttcgctgaactgttgttgcgcgtggtagagctgttcaag
aaaaaaccggcgctgctggcgcactaccagacccgtttcaatcacatcctggtcgatgag
tttcaggacaccaacggcattcaataccagttcgtcaaactgctggccgggccgcatact
gatatcactgctgtcggtgatgacgatcaatcgatttacggctggcgcggcgccagggtt
gagaatctcaatacctttctgaaggatttcaagcaatcgcgcattattcgtctggagcag
aattaccgctcgacagcgacgattctggccgctgccaatgccgtcatcgatcacaacact
ggtcggctcggcaaagagctctggaccgaaggcaacaaaggcgaagccattgccatgtat
tcggcgttcaacgagcaggaagaagcgcgttttatcgctgagaaaatagagcagtgggtc
gatagcggcaaggactacagcagcatcgccattttgtatcgcagcaacgcccagtcacgt
gtgctggaagaagcactgttgcagcggcgaattccgtaccgcatttatggtggcttacgc
tttttcgaacggcaagagatcaaggacgcactggcatatttgcgcctgacattcaaccgt
gatgacgacgctgcgtttgaacgcgtggtcaatacgccgactcgcggtatcggcgagaaa
accgtcgaaaccctgcgtgagcgtgcgcgcctgcaccagatgtcgttgtggaaggcgacg
caacttttggtcaacgaaaagggtttgccggcacgggcattagccgccttgcaaggtttt
atgcaacttgtcattaccctcgacagcagcaccaacgaagtgccgctgcacgaacagatg
cgcacggtcattcatgaatcaggtttggcggcgatgtacgcagccgagcgcggcgagaaa
gcactggctcgtaaagaaaacttggaggaattgatcaacgccgcacgcgagttcgaaccg
gatgaagaagtcgaggacttatcaccgctggccggctttttgacacacgccgcgctcgaa
gccggcgaaacccaagccagcgaattcaatgacgccgtgcagatgatgacactgcattcg
gcaaaaggtctagagtttccgttggtgttcatcgctggtatggaagagggcttgttcccg
catagcatgtcgatggaagaaccgggtcggttggaggaagagcgtagactttgctacgta
ggcatcacccgcgctaaagagaaactgtttctaacccgtgccgagaaacgccggatgtgg
ggccgcgaaagttattccgactggtcgcgctttgtcgatgaaatcccatcggaattgcta
caggagattcgcctgggcggcaaactgacgacgccggtttatcagcgcagccatagcagt
gcatcacttccgaattacccattcaaggttggcagcgacgtcgagcacagtgcttttggt
attggcactgtactcggttatgaaggtgatggaccgcagatgcgggtacaagtgaatttc
actggggccggctgcaagtggctggtgcttgcctatgcaaagctgaatgccgtttga
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