Permianibacter aggregans: E2H98_11645
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Entry
E2H98_11645 CDS
T06332
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pagr
Permianibacter aggregans
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagr03021
]
E2H98_11645 (rpoH)
Transcription machinery [BR:
pagr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2H98_11645 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_Tnp_ISL3
GntR
HTH_25
HTH_3
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QGX40288
LinkDB
All DBs
Position
complement(2640098..2640949)
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AA seq
283 aa
AA seq
DB search
MSKTMAMVPVVPQGSLDAYITTVNSMPILSAEEEHSLALRFTEQGDLEAARHLVLSHLRF
VVHIARSYSGYGLPQGDLIQEGNIGLMKAVKRFNPNVGVRLVSFAVHWIKAEIHEYVLKN
WRIVKVATTKAQRKLFFNLRKAKSGSNWLTHEETKAISRDLNVPEEEVRRMEQRLYSRDA
SFDAPTDAGDEDAFAPEHYLEDNRYDPAIALEEGQYQSHREDQLHVALAGLDARAKDILQ
RRWLAEDKATLQDLADEYGVSAERIRQIENAAMKKLKSAILTA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacaatggctatggtaccagttgtcccccagggcagcctggatgcctacatc
acaacggtgaactcgatgccgattctgtcggccgaggaagagcacagcctggcgctgcgc
tttaccgagcaaggtgatctggaagccgcgcgccacctggtgctgtcgcacctgcgcttt
gttgtgcatatcgcccgttcctacagcggctatggtttgccccaaggcgacctgatccag
gaaggcaatatcggcctgatgaaggcggtcaaacgcttcaacccgaatgttggcgtgcgc
ctggtatcgttcgcggtgcattggatcaaagccgaaatccatgaatacgtgttgaagaac
tggcgtatcgtcaaggttgcgacaaccaaggcccagcgcaaactgttcttcaacctgcgc
aaagccaagtccggcagcaactggctgacgcacgaggaaaccaaggcgatttcccgcgat
ttgaacgtgccggaagaagaagtgcggcggatggagcaacggctctattcacgcgacgcc
agctttgatgccccgaccgacgccggcgatgaagacgccttcgcgccagagcattatctc
gaagacaatcgctacgacccggcgatagcgctggaagaaggtcagtaccagtcgcaccgc
gaagaccagctgcatgtggccctcgccggcctcgatgcccgcgccaaagacattctgcag
cgtcgctggttggctgaagacaaggccaccttgcaggatctggccgatgaatacggcgtt
tccgccgagcgcatccggcagattgaaaacgccgcgatgaaaaagctgaaatccgcgatt
ctgaccgcgtaa
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