Permianibacter aggregans: E2H98_16090
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Entry
E2H98_16090 CDS
T06332
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E2H98_16090 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_16090 (xseA)
Enzymes [BR:
pagr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E2H98_16090 (xseA)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E2H98_16090 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
QGX41105
LinkDB
All DBs
Position
complement(3571642..3572982)
Genome browser
AA seq
446 aa
AA seq
DB search
MQQRQVLTVGELMSRARRLLEGEFGLIWLEGEISNFSSPGSGHWYFSLKDSQAQVRCALF
RNRNQLLSYRPKDGDKVLIRARVSLYEPRGDFQLIGEYLEPAGFGALQQQFEMLKHKLQA
EGLFDEERKKPLPAFVQTLGVITSPTGAALHDVLSVLKKRAPQVRVIIYPAMVQGKEAAQ
TLIDALATANRRNEVDALLLTRGGGSLEDLWSFNDEALARAITESQLPIVSAVGHEVDFT
IADFVADQRAPTPSAGAALLSTDQQTMALQIGHIAQQFQRKLQQLLQHKRQQLAHLQTRL
RAPEFLLQRHQQRVDELRQRLQRASLQTIAQRRERLQRWQSMLQQLSPRQRLLQRREKLD
QLQQQLHQHYRQQSQQRRMQLKNLVQQLHQISPLATLARGYTLTRVAETGVYLRDASKLS
VGTRIETLTSSHQIDSQVVAVRPRKP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacgccaagtcctgaccgtcggtgaattaatgagccgcgcccgccgcctgctg
gaaggcgaatttgggcttatttggctcgagggcgaaatttccaatttcagcagccccggc
tccggtcactggtatttctcgctgaaagacagccaggcccaggtgcgctgcgcgctgttc
cgcaaccgcaatcaactgctgtcctaccgaccgaaagacggcgacaaggtgttgatccgg
gcccgcgtctcgctgtatgaaccgcgtggtgattttcagttgattggcgaatacctcgaa
ccggctggcttcggcgctttgcagcagcagtttgaaatgctgaagcacaagctgcaggcg
gagggtctgttcgatgaggaacggaaaaaaccgttgccggcttttgtgcaaacgcttggc
gttatcacctcgccgaccggcgccgccttgcatgatgtgctgtcggtattgaaaaagcgc
gcaccgcaagtgcgagtgattatttacccggctatggtacaaggcaaagaggcagcacaa
acactgattgacgcactggcgacagccaatcgccgcaacgaagtcgatgcgctattgctg
acccgtggtggcggttcgctggaagatctatggagcttcaatgatgaggcactggcgcgg
gcaattaccgaaagccaactgccgatcgtttccgctgtcggtcacgaagtcgatttcacc
attgccgattttgttgccgatcaacgggcaccaacgccttcggctggtgctgctttactg
agtaccgatcagcaaacgatggcgctgcaaatcggccacatcgcccagcagttccaacgc
aagctgcagcaattgctgcaacacaagcgacaacagcttgcgcatctgcaaacccgttta
cgggcaccggaattcctgttgcagcgacatcaacagcgcgttgacgaattgcgccaacgc
ctgcagcgcgccagcctgcaaaccattgcgcagcgccgcgaacgtctgcaacgctggcag
tcgatgttgcaacaactgtctccgcgtcagcgtctgttgcaacgccgggaaaaacttgat
caattacaacagcaattgcaccagcactatcggcaacaatcgcaacagcgccgtatgcaa
ttgaaaaacctggtgcaacaactgcatcaaatcagcccgctggcgacgctggcacgcggt
tatacgttgacccgtgttgctgaaaccggcgtttacttgcgtgatgccagtaaactttcc
gtcggcacccgaatcgaaacgctgacttcctcgcaccagatcgacagtcaggtcgttgcg
gttaggccaagaaaaccctga
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