Permianibacter aggregans: E2H98_18070
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Entry
E2H98_18070 CDS
T06332
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pagr
Permianibacter aggregans
Pathway
pagr03030
DNA replication
pagr03430
Mismatch repair
pagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2H98_18070 (holB)
03430 Mismatch repair
E2H98_18070 (holB)
03440 Homologous recombination
E2H98_18070 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagr03032
]
E2H98_18070 (holB)
03400 DNA repair and recombination proteins [BR:
pagr03400
]
E2H98_18070 (holB)
Enzymes [BR:
pagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2H98_18070 (holB)
DNA replication proteins [BR:
pagr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2H98_18070 (holB)
DNA repair and recombination proteins [BR:
pagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2H98_18070 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
QGX41472
LinkDB
All DBs
Position
4015648..4016595
Genome browser
AA seq
315 aa
AA seq
DB search
MSLPVWLQPTFQHLLQAIKQQRVNHAPMLHGSIGIGKRLLAKAYAQRLLCRAQTDEACGV
CEECLLFQAGSHPDFHAVSIVEGKQSISIEQIRELSVSLQISAHRSGFRVALIEPAEAMT
IGAANALLKTLEEPGGNTVIVLVVDDLSKVPATIRSRCQRMPVAAPSSEQARQFLGADLP
DLDPETAEKLLQISASAPLLVKLRWQQGALQQVEALEQGLKAIARGQASAAEVAAGQSDI
ELALASLHRIVIGGLQKSLQHEGPLPASLWDGFAETVQQAALAYRRNPALNGALLLTSVL
VQWFDFTAFLRHSKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccggtttggttacaaccgacgtttcagcacttgctgcaggcaatcaaacag
caacgcgtcaatcatgcgccaatgttgcatggttcgatcggtatcggtaagcgcttgttg
gccaaagcctatgcgcaacgtttgctgtgccgggcgcaaactgatgaagcctgcggagta
tgtgaagagtgcttactgtttcaggcaggcagtcatccggattttcacgccgtatcgatt
gtcgagggcaagcagagcatcagtatcgaacagattcgtgagctgtcggtcagcttgcag
atcagcgcccatcgttcaggatttcgggtcgcgttaatcgagccggcggaagcgatgacc
attggcgccgccaatgccttgttgaaaacactggaagagccgggcggcaataccgtgatc
gtgctggttgtcgatgatttgagcaaggtgccagcgacaattcgcagtcgctgccagcgc
atgccggtcgctgcaccatcaagcgaacaggcacgccaatttctgggggcagatttgccg
gatctcgatccagaaaccgccgagaaactgctgcagatcagtgccagtgcgccgttgctg
gtgaaactacgttggcagcaaggcgcattacaacaggtcgaggcgctggagcagggcttg
aaagcgatcgcccgaggccaggcaagtgccgccgaagtggcggctggccaaagcgatatc
gaactggcgctggccagtttgcatcgcatcgttattggaggtttgcaaaaaagcctccaa
catgaaggcccattgccggcgagtctctgggatggctttgcagaaacggtgcagcaggca
gccctggcgtatcgccgcaatccggcattaaacggtgcgctactcttgacctcggtgctg
gtgcaatggtttgatttcaccgctttcctgcgccatagtaaggcttaa
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