Permianibacter aggregans: E2H98_18105
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Entry
E2H98_18105 CDS
T06332
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pagr
Permianibacter aggregans
Pathway
pagr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pagr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2H98_18105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pagr02022
]
E2H98_18105
02035 Bacterial motility proteins [BR:
pagr02035
]
E2H98_18105
Two-component system [BR:
pagr02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
E2H98_18105
Bacterial motility proteins [BR:
pagr02035
]
Pilus system
Twitching motility proteins
E2H98_18105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_30
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
QGX41478
LinkDB
All DBs
Position
complement(4023656..4025026)
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AA seq
456 aa
AA seq
DB search
MKNPLALIVDDEPDILELLSITLGRMRVDTKEAATLQEARQLLEDTPFDMCLTDLRLPDG
DGIELVKHIQQVKPNLPVAVITAHGNMQTAIEAMKAGAFDFLSKPIDLNTLRDLVKNALH
LQPPAPTTKESDIPTGSPRLIGSSSRMSALRQTIAKVSRSQAPIHITGESGTGKELVARL
IHALGPRKEGPFVPVNCGAIPGELMESEFFGHKKGSFTGAIADKPGLFQTADGGTLFLDE
VADLPLTMQVKLLRAIQERAVRPVGASKEIAVNVRIVSATHKDLAELVNAGQFRQDLFYR
INVISVTTPSLRDRIEDIPELAQYILKKLSERHHVDEPKLTASAINGLKKYAFPGNIREL
ENILERALTLADGHEIEIEDLQLPDSPMEVVDPAALAMITPGKRGDIPLDMYLEKIERDA
VLEALEFCRWNKTQAARKLGISFRAMRYKLQKLGLE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacccgttagcgctgatcgtcgatgacgaaccggatattctcgaactgctgtcc
atcacgctaggccgcatgcgcgtcgacaccaaagaagcggcaacgctgcaagaagcgcga
caactgctggaagacacgccgttcgatatgtgtctgactgatctgcgcctgccagatggc
gatggcatcgaattggtcaaacatatccagcaagtcaaaccgaatctgccggtcgccgtg
atcaccgcacatggcaatatgcagaccgccattgaggcgatgaaggcaggcgcttttgac
tttctgtcgaaacccatcgatttgaacacgctgcgcgatctggtcaagaacgcgctgcat
ctgcaaccgccggcaccgaccactaaagaaagtgatattccaaccggttcgccacgtctg
attggttccagcagccgcatgtcggccttgcgccaaaccatcgccaaagtgtcgcgctcg
caggcgccgatccatatcaccggcgaatccggtaccggcaaagagctggtggcgcgtttg
atccacgccttgggtccacgcaaagaaggaccatttgtaccggtcaattgcggcgccatt
cccggcgagttgatggaaagcgagtttttcggccacaagaaaggcagctttaccggcgcc
attgccgacaaaccgggcttgtttcaaaccgccgatggcggcacgctttttctcgatgaa
gtcgccgacctgccgttgacgatgcaagtcaaattgctgcgggccattcaggagcgtgcg
gtacgcccggttggcgccagcaaggaaattgcggtcaatgtgcgcatcgtcagtgctacc
cacaaagatctggccgagctggtcaatgccggccagtttcgtcaggacttgttctataga
atcaacgttatttcggtaacaacgccatcgctgcgtgatcgcattgaggatattccggaa
ctggcgcaatacatcctgaaaaagctgtcggagcgtcatcatgtcgacgaaccgaaactg
accgcttcggcaatcaatggcctgaaaaaatatgcgttccctggcaacatccgcgagctg
gaaaatattctcgagcgggcgctgaccttggctgacggccacgaaatcgaaattgaggat
ttgcaattaccggatagcccgatggaggtcgttgatccggcggcactggcgatgatcacg
ccaggtaaacgcggcgacattccgctcgacatgtatctggaaaaaatcgaacgcgatgcg
gtgctggaagccctggaattttgtcgatggaacaagacccaggcagcccgcaagctcggc
atcagtttccgggcgatgcgctataaattgcagaaattgggactcgaataa
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