KEGG   Porphyromonas asaccharolytica: Poras_0310
Entry
Poras_0310        CDS       T01485                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pah  Porphyromonas asaccharolytica
Pathway
pah03410  Base excision repair
pah03430  Mismatch repair
pah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Poras_0310
   03430 Mismatch repair
    Poras_0310
   03440 Homologous recombination
    Poras_0310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pah03400]
    Poras_0310
DNA repair and recombination proteins [BR:pah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Poras_0310
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Poras_0310
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Poras_0310
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Toprim
Other DBs
NCBI-ProteinID: AEE12264
UniProt: F4KME5
LinkDB
Position
381196..382977
AA seq 593 aa
MTNEWQYTPFTREEEVGGSQLAHALRIPAVAGRLLYRRGIRTEADAQRFFHPSLEDLHDP
FLMQDMDLAVKRLNKALGRKEHIMIYGDYDVDGTTAVSLIYKYLRSAGCSEHLLSYYIPG
RDDEGYGVSYRGVDHAHEIGATLIIVVDCGIKAINEIAYAKTLGIDFIICDHHHPDDQLP
DAAAVLDPKRPDCHYPFEELCGCGVAFKFMQAFGMNNGFPSASLFKLLDLVAVSIAADLV
SVMDENRILAHYGLRQLNRNPSMGLKGIIKTCGLEGRKITMSDIIYKIGPRINASGRMMN
GREAVDLLLSNDAKTTARMSELIDEYNVRRRELDRSTTDEAMQLLQVNPELAHQPIVVLY
QPDWHKGVIGIVASRVAEYTNRPTIVLTGTSDRIVGSARSVGGIDIYSIIEEARDLLLNF
GGHTYAAGLTLLPDKLPDFRAYIQGVNAVTTSDRAQSTPIEIDAEIELREVTQRLYTTIQ
RFAPYGPDNYPPLFVTQQLYDGGASRAVGRNSEHFKVDAIPTLGSKKHCPGIAFNQAPAF
RFMKKSSAGRAIAPFALVYQIDENHFNGIVSLQLLIKDVKPQRPGEDLFASQR
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgacgaacgaatggcaatacactcccttcacccgagaggaggaggtgggtggctctcaa
ctggcgcatgccttgagaatacccgctgtggcgggacgcctactctatcgtcgcggtata
cgtacagaagcagatgcacagcgattctttcacccatcgctagaggatctgcacgacccc
tttctgatgcaagatatggatctggcggtcaagcgtctcaacaaggcgctaggacgcaag
gagcatatcatgatatacggcgactacgatgtagatggcactacagcagtatcactaatc
tataagtacctccgctcggcggggtgcagcgagcacctgctgagctactatatcccagga
cgggacgatgagggctacggcgtatcctatcggggcgtggatcatgcccatgagataggc
gcgacgctgatcatcgtggtggattgtggcatcaaggctatcaacgagatagcctatgct
aagacgttggggatagactttatcatctgcgatcaccaccaccctgacgaccagctgccc
gatgccgcggccgtcctagaccctaagcgaccagactgtcactacccctttgaggagctc
tgtgggtgtggcgtcgcgtttaagtttatgcaggcctttgggatgaataatgggttcccc
tcggcttcgctctttaagctcctagacctggtcgctgtgagtattgcagctgatctggtc
tctgtgatggatgaaaatagaatcttggcgcactatggactccgtcagctcaatcgcaat
ccctcgatggggctcaaggggatcatcaagacttgtggtctcgaagggcgtaagatcacg
atgtccgacatcatctacaagatcgggccgaggatcaacgcctcgggacgtatgatgaat
ggccgcgaggcggtcgatctgctcctgagcaatgatgctaagacgacagcccgcatgagc
gagctgatcgatgagtacaacgtgcgtcgtcgcgagctagaccgctctacgaccgacgag
gctatgcagctcctacaagtcaatcctgagctggcacatcagcccatcgtagtcctctac
cagcctgactggcacaagggggtcataggaatcgttgcctctcgtgtggcggagtatacc
aatagaccgacgatcgtgctgactggcacgagcgaccggatcgtgggctcggcgcgaagt
gtcggcgggatagacatctacagcatcatcgaggaggctagagatctgctcctaaacttc
ggtgggcacacctatgctgctgggttgacactcttgccggacaagctacccgacttccgc
gcttacatacagggagtcaatgccgtgacaactagtgatcgagcacagtccacaccgata
gagatcgatgccgagatagagcttcgtgaggtgacgcagagactctacacgacgatacag
cgctttgctccgtatggaccggacaactacccgccgctctttgtgacacagcaactctat
gacggaggggctagcagagctgtgggacgcaatagcgagcactttaaggtagacgctata
cctacactgggatccaagaagcattgcccagggatagccttcaaccaagcacccgccttc
cgctttatgaagaagtcttcggcaggaagagcaattgcaccctttgcccttgtctaccaa
atagatgagaaccactttaacggaattgtctccctacagttactgatcaaggatgtcaag
ccacaacgacctggagaggacctctttgcctcccagcgatga

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