Porphyromonas asaccharolytica: Poras_0538
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Entry
Poras_0538 CDS
T01485
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pah
Porphyromonas asaccharolytica
Pathway
pah03030
DNA replication
pah03430
Mismatch repair
pah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Poras_0538
03430 Mismatch repair
Poras_0538
03440 Homologous recombination
Poras_0538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pah03032
]
Poras_0538
03400 DNA repair and recombination proteins [BR:
pah03400
]
Poras_0538
Enzymes [BR:
pah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Poras_0538
DNA replication proteins [BR:
pah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Poras_0538
DNA repair and recombination proteins [BR:
pah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Poras_0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEE12491
UniProt:
F4KNT3
LinkDB
All DBs
Position
662451..663218
Genome browser
AA seq
255 aa
AA seq
DB search
MTLQLDRPLVVFDIEATGLDITNDRIIELTILKLMPDGERIVRTRRFNPEMPIPAESTAI
HGITDEDVRDCPPFRACAKSLAELIDGCDLAGYNSQRFDLPMLGEEFLRAGVEVDLLSRQ
HIDVQTIFHKMEPRTLEGAVRFYCHREHIGAHGAEADTIATLDVLLAQLDKYGDALPHSV
KELSDLTTYHRNVDLAGRIVLDDNDVPVFNFGKHKGRSVETVLREEPGYLSWLLQADFSR
DTKRQFLLIKEQMKP
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacgctacaattggatcgtccgctagtggtctttgacatagaggctacgggactggat
attacgaatgaccgtatcatcgagctaacgatactcaagctgatgcctgatggggagcgg
atcgtacggacacgacgcttcaacccagagatgcctatcccagccgagagcacagcgata
catggtatcacggatgaagatgtgcgtgactgtcctccctttagagcttgtgctaagagc
ttagcggagctgatcgatgggtgcgacctggcgggctacaactcgcagcgctttgacctg
ccgatgctgggggaggagttcctccgtgctggtgtggaggtggatttgctctctaggcag
cacatagacgtgcagacgatctttcacaagatggagccacggacgcttgagggggctgtg
cgcttctactgtcatcgtgagcatatcggagcgcatggtgccgaggcggacacgatcgct
acgctcgatgtgctactggctcagctggataagtatggcgatgcactgccacatagtgtc
aaggagctgtctgatctgaccacttatcatcgcaatgtagacctcgctgggcgcattgtg
ctagacgataacgatgtgccagtctttaactttggcaagcacaaggggcgctctgtcgag
acagtcttgcgagaagagcctggctacctcagttggctactgcaagcggacttctcacga
gacacgaagcgtcagttcctcctgatcaaggagcagatgaagccttag
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