Porphyromonas asaccharolytica: Poras_0703
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Entry
Poras_0703 CDS
T01485
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
pah
Porphyromonas asaccharolytica
Pathway
pah03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pah00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Poras_0703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pah03011
]
Poras_0703
Ribosome [BR:
pah03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Poras_0703
Bacteria
Poras_0703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
DUF2110
EXOSC1
BPL_C
CsrA
Motif
Other DBs
NCBI-ProteinID:
AEE12653
UniProt:
F4KJS6
LinkDB
All DBs
Position
872160..873956
Genome browser
AA seq
598 aa
AA seq
DB search
MSNNPTDRIQPLADFDWSGYAQDTDISPEMRKEREAIYDKTLTTIKENEVVMGKVMSISK
REVLVNIGYKSAGIISANEFNYNKDLKVGDEVEVLVESKEDRFGQLQLSHRKARAARAWE
KIAAAQENDEVILGYIKSRVNGGMIVDIFGIEAFLPGSQIDVRPIKDYDAFVDKTMEFKI
VKVNPEYRNVVVSHKVLIEAELEQQKKEIISKLEKGQVLEGVVKGITSYGAFVDLGGVDG
LIHITDLSWGRIGDPSEVVSLDEKINVVILDFDEEKTRIALGLKQLMPHPWDALDPNLKE
GDIIHGRVVVITDYGAFVEVIPGVEGLIHVSEMSWTQHLRSAQEFLTVGQEVDAVVLMLD
REDRKMSLGLKQLKPDPWETIEQRFPVGSNHEARVRNFTNYGVFVELDEGIDGLIHISDL
SWTRKVKHPNEFVKVGQMIEVQVLEIDKENRRLSLGHKQVTENPWDEFAKEFTIGSIHEG
TVIRMNEKGATIALPYGVEAFATPKHLVKEDGSSVALDEKLPFKILDFNPEMQRIIVSHS
RIHEDAERAERRQAATEERNQQVRDAAAVAATQQSVERATLGDLDELAALKERLESAE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaatccaacggatcgtatccagccactcgcagacttcgactggtctggctac
gcacaggacactgacatctctcctgagatgcgcaaagagcgcgaggcgatttatgacaag
actctgacgacgatcaaagagaacgaggtcgtcatgggtaaggtcatgtctatcagcaag
cgcgaggtactagtcaacatcggctacaagagtgcaggcatcatctctgccaacgagttt
aactacaacaaggatctcaaggtcggagacgaggttgaggtacttgtcgagagcaaggag
gaccgcttcggtcagctacaactctctcaccgcaaggctcgtgcagctcgtgcttgggag
aagatcgcagctgctcaggagaatgacgaggtcatcctaggctacatcaagagccgtgtc
aacggcggtatgatcgtcgacatctttggcatcgaggcattcctcccaggatcacagatc
gacgtacgtcctatcaaggactacgatgcttttgtcgacaagacgatggagttcaagatc
gtcaaggtcaaccccgagtatcgcaacgtagtcgtatcacacaaggtcctcatcgaggca
gagctcgagcagcagaagaaggagatcatctccaagctcgagaagggtcaagtcctcgag
ggtgtcgtcaagggtatcacctcttatggtgctttcgtcgacctcggtggcgtagacggt
ctgatccatattaccgacctctcttggggtcgtatcggagatccctctgaggtggtctct
ctcgatgagaagatcaacgtggtcatcctcgactttgatgaggagaagacacgtatcgct
cttggtctcaagcagcttatgcctcacccatgggatgcgctcgatcctaacctgaaggag
ggcgacatcatccatggccgtgtcgtcgttatcacagactacggtgcatttgtagaggta
atcccaggtgtcgagggtctgatccacgtcagcgagatgtcctggacgcagcacctacgc
agtgctcaggagttcctcaccgtaggtcaggaggtagacgctgtcgtcctcatgctcgac
cgcgaggatcgcaagatgagccttggtctcaagcagctcaagcccgatccatgggagacc
atcgagcaacgcttccctgtaggatctaaccacgaggctcgcgtacgcaacttcaccaac
tacggtgtcttcgttgagctcgacgagggtatcgacggcctgatccatatcagcgaccta
tcctggacacgcaaggtcaagcaccccaatgagttcgtcaaggtcggtcagatgatcgag
gtacaggtactagagatcgacaaggagaaccgtcgtctcagcttgggtcacaagcaggta
acggagaatccttgggatgagttcgctaaggagttcaccataggctctatccacgagggt
accgtcatccgtatgaacgagaagggtgccaccatcgcactaccttatggtgtagaggct
tttgctactcctaagcatctagtcaaggaggatggctctagcgtcgcactagacgagaag
cttcccttcaagatcctagacttcaaccccgagatgcagcgcatcatcgtctctcacagc
cgcatccacgaggatgctgagcgtgccgagcgtcgtcaggctgctaccgaggagcgcaac
cagcaggtacgtgacgctgccgctgtagctgctacacagcagagcgtagagcgtgctact
ctaggagaccttgacgagctagctgctctcaaggagcgtctagagagtgctgagtaa
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