Porphyromonas asaccharolytica: Poras_1315
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Entry
Poras_1315 CDS
T01485
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pah
Porphyromonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:
pah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pah03032
]
Poras_1315
03400 DNA repair and recombination proteins [BR:
pah03400
]
Poras_1315
Enzymes [BR:
pah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Poras_1315
DNA replication proteins [BR:
pah03032
]
Prokaryotic type
DNA Topoisomerases
Poras_1315
DNA repair and recombination proteins [BR:
pah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Poras_1315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
DUF6181
HTH_IclR
Urease_gamma
Motif
Other DBs
NCBI-ProteinID:
AEE13254
UniProt:
F4KM88
LinkDB
All DBs
Position
complement(1699807..1702281)
Genome browser
AA seq
824 aa
AA seq
DB search
MANQKNLVIVESPAKAKTIGKFLGADYKVLSSYGHIRDLKPSSFSVDVEHHFAPIYEIPA
DKQRLVSELRKAAKGSDIVWLASDEDREGEAIAWHLYQVLDLKDKETHRIAFHEITKSAI
QHAIQNPRSINENLVDAQQARRVLDRIVGFELSPVLWRRVGPSLSAGRVQSVAVRLIVER
EREILAFQPETSFAITTRLETKGGDTFSATLPENLPSEEAARQLMQRAIDSQSTFAVQQV
EQKPGRRSPSAPFTTSTLQQEASRKLGMSVSNTMRVAQALYERGLITYMRTDSVNLSSLA
LHDAETVILEQWGADYYQRRHYHAKSKGAQEAHEAIRPTYLRNATIQGTKQEQALYDLIR
KRTLASQMADARIERTIAQIASQGADSVRLEARGEVIVFDGFISAYTESRDDEEDTSGNV
LPKLREGDSLQLREIEGRQSFTKPKPRYTEASLVRKMEELGIGRPSTYAPTIQTIQNREY
VRRGESQGESRDVLYLNWQHGAGNTTIKSHKQKERYGGDRGRLVPTDMGIVVTDFLMENF
SRVVDYNFTADVEEHFDKVAEGEAHWQDLIGTFYDKFHPIIEEQSQSGAKRYTGERLLGT
DPVSGKPVIARIGRYGPMVQIGEAPDSSLPEEERERLKPRFASIPSNLLIETITLEEALK
LFDLPRTVGEFEGGDVVAAVGRFGPYLRHKGAFTSIPKSSGLTPEEITLQEAIELIEEKR
RKDAASLLKSFPEDPDIVIRDGRWGAYIKVGKKNYKLTKEQKAEPTKLTYAEVVAIIAEQ
DNETPKKGRATAKKATSTSKKSTTKKTTSTAKKAAPKRSAASKS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccagaagaacttagtaatagtagagtcccccgcaaaggcgaagacgattggc
aaattcctcggtgctgactacaaagtgctctcgagctatggacacatacgtgacctcaag
ccgagcagcttcagtgtagacgtggagcatcacttcgcacctatctatgagatccccgca
gataagcagcgtcttgtctcggagctgcgcaaagctgctaaggggagcgacatcgtatgg
ctcgcatccgatgaggaccgcgagggagaggcgatcgcatggcacctctatcaggtgcta
gaccttaaggacaaggagacacatcgtatcgcattccacgagatcactaagagcgccata
caacatgctattcagaatccacgatcgatcaacgaaaaccttgtagatgcccagcaggcg
cgtcgtgtcttagatcgtatcgtgggctttgagctctcacctgtcctctggagacgtgtc
gggccctcgctctcggcaggacgtgtgcaaagcgtcgctgtgcgtctgattgtagagcgg
gagcgcgagatattagccttccagccagagacctcttttgctatcacgacacgcctagag
accaagggtggagacactttctctgccacactccctgaaaaccttccctccgaagaagct
gctcgccagcttatgcagcgagctatcgatagtcagtccacctttgctgtacagcaggta
gagcaaaagcctggacgtcgctctccgtcggcaccttttaccaccagtacgctccagcag
gaggcttctcgcaagctcggtatgagcgtctccaatacgatgcgtgtggcgcaggctctc
tacgagcgaggtctcatcacctatatgcgtaccgactcggtcaatctttctagccttgca
ctccacgatgcagagacagtgatcctagagcagtggggggctgactactatcagcgccga
cactatcacgctaagagcaaaggggcgcaggaggcgcacgaagctattcgtccgacttat
ctgcgcaacgctacgatacagggtaccaagcaggaacaagccctctacgacctcatacgc
aagcgcacactcgctagtcagatggccgatgctcgcatcgagcggacgatagcgcagatc
gcttcgcaaggcgctgattctgttcgtttagaggctcgtggcgaggtgattgtcttcgac
ggtttcatcagcgcttacacggagagtcgtgatgacgaggaggatactagtggcaatgtg
cttcccaagctgagggagggtgactcgctacagctacgagagatagaggggcggcaatcc
tttaccaagcctaagccccgctacacggaggcatccctcgttcgcaagatggaggagcta
ggcatcggtcgtccgtcaacttatgctccgactatccagacgatccaaaacagagagtac
gtgcgtcgtggcgagagccaaggcgagagtcgcgatgtgctataccttaactggcagcac
ggagcaggaaatacaaccatcaagtcgcacaagcagaaggagcgctatggaggcgatcgc
ggacggcttgtccccaccgatatggggattgtcgtgaccgacttcctgatggaaaacttc
tcccgtgtcgtcgactataacttcacggcagatgtcgaggagcactttgacaaagttgcc
gagggagaggctcactggcaagatctgatcggcacgttttacgataagttccacccgatc
atcgaggagcagagccagtctggagctaagcgctatacaggcgagcgactgctcggcact
gatcctgtaagtggtaaaccagttattgctcgcatcggacgctatggtccgatggtgcag
atcggagaggctcccgacagttctctgcctgaggaggagcgggagcgtctcaagcctcgc
ttcgccagcatcccgagcaatctgctcatagagacgatcacgctagaggaggcgctcaag
ctctttgacctgccccgcacggtgggtgagtttgagggtggcgatgtggttgctgctgtg
ggacgctttggcccttacttgcgtcacaaaggtgcctttacctcaatccccaagagcagt
ggtctgacacccgaggaaatcacgctccaggaagcgatcgagctcattgaggaaaagcgt
cgtaaggatgccgccagtctgctcaagagcttccccgaggaccctgatattgtgatccgt
gacggacgctggggcgcttacatcaaggtgggcaagaagaactacaagctcaccaaggaa
cagaaagccgagcccacgaagctgacatacgccgaggtcgtcgctatcatcgctgagcaa
gataacgagactcctaagaagggtcgtgcaacagcaaagaaggctactagcacatctaag
aagagtacgaccaagaagacgactagcactgctaagaaggctgcgcctaagcgtagtgcg
gcctctaagtcgtga
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integrated database retrieval system
