Pyrobaculum aerophilum: PAE0696
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Entry
PAE0696 CDS
T00073
Name
(GenBank) AAA family ATPase, possible cell division control protein cdc48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pai
Pyrobaculum aerophilum
Pathway
pai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PAE0696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pai03019
]
PAE0696
03009 Ribosome biogenesis [BR:
pai03009
]
PAE0696
04131 Membrane trafficking [BR:
pai04131
]
PAE0696
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pai04147
]
PAE0696
Messenger RNA biogenesis [BR:
pai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PAE0696
Ribosome biogenesis [BR:
pai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PAE0696
Membrane trafficking [BR:
pai04131
]
SNARE
SNARE associated proteins
Others
PAE0696
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PAE0696
Exosome [BR:
pai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAE0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_22
AAA_5
AAA_33
AAA_2
AAA_14
AAA_28
AAA_lid_PRS2_C
IstB_IS21
Vps4_C
nSTAND3
AAA_18
UFD1_N2
Mg_chelatase
RNA_helicase
AAA_24
Sigma54_activat
ABC_tran
PhoH
AAA_7
DUF815
NPHP3_N
ATPase
Parvo_NS1
AAA_17
Zeta_toxin
AAA_19
AAA_30
SLFN-g3_helicase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AAL62959
UniProt:
Q8ZYN4
LinkDB
All DBs
Position
382129..384324
Genome browser
AA seq
731 aa
AA seq
DB search
MSDWIELRVQESKARDANRPVVRIDPEVMERAGIVVGDVVEIVGRRRTAAKVWNGLPEDR
GKGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLR
EYVLVEGDMLQIHVLSQPLTFQVVQTKPSNTVLIITEDTQIQIFEKPVSGVKIPHVTWED
IGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAY
FVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVV
AQLLTLMDGLQERGQVIVIGATNRPDAVDPALRRPGRFDREIWINPPDFKGRYEILLIHT
RNMPLAPDVDLRKLAEMTHGFSGADLAALAREAAMSALRRAIQSGLIDLNQPSIPPEVFE
KIKVTMTDFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPDKF
KKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIF
RKARMAAPAVVFIDEIDALATARGLGGDSLVTERVVAQLLAEMDGIKALENVVVIAATNR
PDLVDPALLRPGRFDRIIYVPPPDFKARLDILLIHTRSTPLAKDVDLEELARRTEGYSGA
DLELLVREATFLALREDINAKEVSMRHFEEAMKKVRPSITPDMLKFYESWLEKARQLTVS
AKAKATPPLYL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactggattgagctaagagtccaggagagtaaggcccgtgacgccaacaggccg
gtggttagaattgaccctgaggttatggaaagggccggaattgttgttggagacgtggtg
gagattgtgggaaggaggaggactgcggctaaggtctggaacggcctccctgaggatagg
gggaaaggcgttattagaatgaacagtattttgcgtaaaaatgcagacgtttcgcttaat
gagactgtaaaagtaagaagggtggagcctaagcccgcggcttttgtaaaactagcccca
gtctctatgactatagccgtcgacgccaatttcttacagtacataaaacaaaggcttagg
gaatacgtactcgttgagggcgacatgttacaaattcacgtcctcagccagcccctgact
tttcaagtagtacaaactaagccatctaacaccgtgttaattattacagaggacacgcaa
attcagattttcgaaaagccggtatctggagttaaaatcccgcatgtgacttgggaggat
attggcgatttagaagacgccaagcagaaaattagagagcttgtggagctccccttgcgc
catcccgagttgtttaaacatttaggcattgagcctcccaagggaattctcctcattggc
cctccggggactgggaagactctcttggccaaggccgttgccaatgaggccaatgcctat
ttcgtcgccataaacggccccgagattatgtctaaatactacggcgaatctgaggcaagg
ctgagggagatatttgaagaggctaagaaaaacgccccggcgataattttcatagacgaa
atagacgccatagccccaaagagagaggaagtgactggggaggtggagaagagagtagtg
gcccagctacttacgctaatggacgggctacaagaaagaggacaagtgatagtcataggc
gccaccaaccgcccagacgcagtagacccggcgttgagaaggccggggagattcgacaga
gaaatttggattaacccgcctgacttcaaggggaggtatgaaattctcttaatacacacc
cgtaacatgcccctggctcctgacgtagatttgagaaaactggccgagatgacccacggc
ttctccggggctgatctggccgccctggctagagaggccgccatgtcggcgttgcggagg
gcgatacaaagcggcttaattgacttgaaccagccgtctatacctcctgaggtgtttgag
aaaattaaggtgacaatgaccgatttcacaagcgcgcttagggagatagtcccctctgcg
ttgagagaaatacacatagaggttcctcgggtccgctgggaggacgtcggaggcttagaa
aacgtaaagcaagagttgagagaagccgtggagtggcctttgaaatatccagacaagttt
aagaaatttggactgaggcctcccaagggcatattgctcttcgggcctcccggcactggg
aagaccctcttggcgaaggccgtggccactgagtcaggcgccaatttcattgcggtaaga
ggcccggagatattctctaaatgggtcggcgagtctgagaaaatggtgagggagattttt
agaaaggcgcgtatggcggcgccggcggtggtgtttatagacgaaatagatgccttagcc
actgcgagagggcttggcggcgactcgcttgtaacagaacgcgtcgtggcgcagttgctc
gccgaaatggacggcataaaggcgcttgaaaacgtggtggtaatcgccgcaacaaataga
cctgatcttgtagacccggcgttgctgaggcccgggcgttttgatagaattatttacgtg
cctcctccagattttaaggcgaggcttgacatcttgcttatacacactagatccacgcct
cttgcaaaagacgtcgacttggaggagctagcccggaggactgagggatattccggggcg
gatttagagcttttagtaagagaggcgacgttcttagcgcttagggaggacataaacgca
aaggaggtttcaatgaggcattttgaagaggctatgaaaaaagtgaggccctctataact
cccgacatgcttaagttctacgagtcgtggctggagaaggccaggcagttaacagtttct
gctaaggcgaaggccacgcccccgctgtatttatga
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