KEGG   Pyrobaculum aerophilum: PAE0698
Entry
PAE0698           CDS       T00073                                 
Name
(GenBank) DNA endonuclease rad2 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pai  Pyrobaculum aerophilum
Pathway
pai03030  DNA replication
pai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAE0698
   03410 Base excision repair
    PAE0698
   03450 Non-homologous end-joining
    PAE0698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pai03032]
    PAE0698
   03400 DNA repair and recombination proteins [BR:pai03400]
    PAE0698
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pai04147]
    PAE0698
DNA replication proteins [BR:pai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PAE0698
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PAE0698
DNA repair and recombination proteins [BR:pai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PAE0698
Exosome [BR:pai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PAE0698
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AAL62961
UniProt: Q8ZYN2
LinkDB
Position
384568..385608
AA seq 346 aa
MGVTELGKLIGKEVRREVKLESLSGKCIALDAYNALYQFLASIRQPDGTPLMDRAGRITS
HLSGLFYRTINLLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRRED
VAKYAKRAVFITSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDYDS
LLFGSPKLVRNLAVSPKRKIGEEVIELTPEIIELDAVLRALRLKNREQLIDLAILLGTDY
NPDGVPGVGPQKALKLIWEFGSLEKLLETVLKGAYFPIDPLEIKKFFLNPPVTDQYATEV
RDPDEAALKDFLIREHDFSEERVSKALERLRKARGKLKTSSLDSFF
NT seq 1041 nt   +upstreamnt  +downstreamnt
gtgggagttactgagttgggtaagcttattggcaaagaggtccgccgcgaggttaaactg
gaaagtctctcgggcaagtgtattgcccttgacgcgtacaacgccttgtaccaattcctt
gcgtctattagacagccagatgggacgcctctaatggacagagctgggaggattactagt
catctctcgggtttgttctaccgtactatcaacctccttgaggccggcattaggcctgtt
tatgtttttgatgggaagcctcccgaatttaaactggctgaaattgaagaaaggaggaag
acgcgtgagaaggccatggaagaggtgttgagggccattaaggaggggaggagggaagac
gtggctaaatacgccaaaagggctgtttttattaccagcgaaatggtggacgaggccaag
aggctgctgagctatatgggcgtaccctgggtccaagctccaagcgagggggaggcgcaa
gcggcttatatggctagaaaaggacactgctgggccgtgggaagccaggattacgattcg
ctgttatttggatcccccaagttagtcagaaatctagcggtatcccctaagcgtaaaatt
ggagaagaggtaatagagctcacgccggaaattattgagctagacgccgtcctcagggct
ttgaggctaaagaacagagagcaactaatagacttggctattttactcggcacagattac
aacccagacggcgttcccggagtgggcccccagaaggcgttaaaactaatatgggaattt
ggatcgcttgaaaaactattagaaactgtattaaagggggcgtatttccccattgacccc
ctggagataaagaagttcttcctcaatcccccagtcactgatcaatacgccactgaggtg
agagacccagacgaggcggccctcaaggactttcttatacgcgaacacgacttcagcgag
gagagggtgtctaaggcacttgagaggctgagaaaagcccgggggaagttaaaaacttcc
tctctcgactcctttttctaa

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