KEGG   Pyrobaculum aerophilum: PAE0735
Entry
PAE0735           CDS       T00073                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
pai  Pyrobaculum aerophilum
Pathway
pai03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAE0735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pai03032]
    PAE0735
DNA replication proteins [BR:pai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PAE0735
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_22 AAA_16 AAA_14 AAA_5 RuvB_N Rad17 AAA_33 AAA_lid_RFC1 nSTAND3 RNA_helicase Zeta_toxin DNAX_ATPase_lid AAA_28 AAA_7 AAA_18 NB-ARC AAA_assoc_2 ABC_tran RFC1 NACHT NTPase_1 TsaE TIP49 AAA_25 AAA_17 RsgA_GTPase AAA_19 AAA_30 DUF815 IstB_IS21 AAA_29 HP_1247_M AAA_2 Gp44_lid MMR_HSR1 SRP54 AAA_3 NPHP3_N Bac_DnaA Viral_helicase1 Mg_chelatase AAA_11 KAP_NTPase SRPRB bpMoxR MeaB AAA_24
Other DBs
NCBI-ProteinID: AAL62990
UniProt: Q8ZYK3
LinkDB
Position
408454..409722
AA seq 422 aa
MALPWIEKYRPKSFAEIVNQEEAKYTLASWICLKFRAPKEFCTRWAKKRDKEVAEAKAIL
LAGPPGVGKTTLVHALAREIRYELIELNASDVRTADRLRQVIGRGLRESSLFGFEGKMVL
FDEVDGLHVKEDKGGLEEIIEIIETAKIPIIMTANNPYDPKFRPLRDISLVVNLKRLSEE
EVVEVLRRICTSEGAKCEEEALRSIAKSSMGDLRAAINDLQMYLSGGRRILTLDDIKRVG
ERNPQLSMFEILDRVYKARWFDEARAVSFNPSFDWEQYFIWALESIPVVYKDLEIASTAY
DRLSKADVFMGRIKRTQEWELLPYALELALGGVSQIKGKPRLPPFIKYGFPQRLLLLAKS
KEARRRRDALVEYLAQNLHASKSVIKSEIIYVLSALSKNNQSIIEKLSKALGINAIDIKS
VL
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgctaccttggattgagaaatacaggcctaaatccttcgccgagattgtgaatcaa
gaagaggcgaagtatacgctggcgtcttggatttgtctgaagttcagggcgcctaaggaa
ttctgcacgcgttgggctaagaaaagagataaggaggtggctgaggctaaggcaattctc
ctggcgggaccccctggtgtggggaagactacgcttgtacatgcgttagctagagaaatt
agatacgagcttattgaactcaacgcaagtgatgtcagaactgcagatagacttaggcaa
gtaatagggagggggctgagggagtcgtcgcttttcggctttgagggcaaaatggtattg
tttgacgaagtagacggcctccatgtaaaagaagacaagggaggtttagaggagattatt
gagataattgaaactgcgaagatcccaatcattatgacggcaaataacccctacgaccca
aaattccgacctctgagagacatatcattagtggtgaacctaaagaggctttcggaagag
gaggtagtggaggtgctgaggaggatttgtacgagcgaaggggctaagtgcgaggaagag
gcgttgaggagtattgcaaagtcgtctatgggagatctgcgcgccgcgattaacgattta
caaatgtacctatcgggggggaggaggattttaacgctagatgatataaaaagagtcggg
gagaggaaccctcagctctctatgtttgagattttagacagagtatataaagcccggtgg
ttcgacgaggctcgcgcagtttctttcaacccctcttttgactgggagcagtattttata
tgggcgcttgagagcatccccgttgtgtataaagaccttgaaatagcgtctactgcctat
gacaggcttagcaaagccgatgtattcatggggaggataaaacggacacaggagtgggag
cttctgccatacgccttggagttagccctagggggagtgtcgcaaataaaagggaagccg
aggcttcctccctttattaaatacggcttcccgcaacgcctcctcctacttgcaaaatct
aaagaggcgaggaggaggcgcgacgcattagtggagtatctagctcaaaatctacacgcc
tctaagtctgtaataaaatctgaaattatttacgtcctttctgcgctatctaaaaataac
cagagtattatagaaaaattaagtaaagctcttggaattaatgctattgatattaaatca
gttctttaa

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