Pyrobaculum aerophilum: PAE1645
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Entry
PAE1645 CDS
T00073
Name
(GenBank) transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
pai
Pyrobaculum aerophilum
Pathway
pai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAE1645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pai03021
]
PAE1645
Transcription machinery [BR:
pai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PAE1645
Prokaryotic type
Archaeal type
TFB
PAE1645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
Desulfoferrod_N
A2L_zn_ribbon
Zn_Ribbon_Prim
ORC6_2nd
Ribosomal_S27e
baeRF_family2
Zn_Tnp_IS91
Zn_ribbon_LysW
ORC6
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AAL63626
UniProt:
Q8ZWS3
LinkDB
All DBs
Position
complement(962325..963326)
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AA seq
333 aa
AA seq
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MSVSNPPSSGKPLKLRVNKDSEGYLSLVTESGEVYKCPICGNDKFVYNYERGEAVCIVCG
AVVQEQLLDLGPEWRAFTSEEKGQRARTGAPLTRLISEALTTVIDWRDKDVSGKELDIKR
KLEVIRLRKWQTRARVQTSYERNFIQAAQELERLRSAMGIPRPCIEQALEIYRQALEKEL
VRGRSVEAMAAAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLLRELNVKVPISD
PILYISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMHGDNRT
QKDFAVAAGVTEVTVRNRYKELAKALNIKVPVK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctcaaatcccccctcctctggaaagcccctcaagctccgagttaataaagat
agtgaaggatatttaagccttgtcactgagagtggcgaggtatataagtgccccatttgt
ggcaacgacaaattcgtttataactacgagaggggagaggccgtgtgtatagtatgtggg
gccgtggtgcaagaacagctcctagacttgggacctgagtggagggccttcacctctgag
gaaaagggccagcgggctcgcacgggcgccccgctcacgaggcttatctcagaggcgctt
accactgtaattgactggagggataaggacgtctccggcaaggagcttgacatcaagaga
aaacttgaagtaattaggctgaggaagtggcagacgagggccagggtccagacttcatat
gaaaggaatttcatacaagcggcgcaggagcttgaaaggctgagaagtgccatgggcatc
ccaaggccttgtatagaacaggcgctggagatctacagacaggcattagaaaaagagcta
gtaagaggcaggtccgtcgaggccatggcggctgctgccctatacatggcgtgtcgcatg
atgaaaatgccgagacctctcgacgaattagtgagatatacgaaggcctctagaagagag
gtggctaggtgttataggctgttgctcagggagctgaacgtaaaagtccccattagcgac
cccatactatacatatcaagaatagcagagcagttaaagctaagcggcgaggtggtcaaa
acggcaattgatatcttacaaaaggcgaaaaaggcgggtattacggcaggtaaagatcca
gcgggtctggcggcagctgctgtgtatatagcatcgctaatgcacggcgacaataggacg
cagaaagacttcgcagtggctgcgggggtgactgaggtgacagttagaaatagatataaa
gagctggcaaaggcgcttaacataaaggtgcctgtaaagtaa
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integrated database retrieval system
