KEGG   Pyrobaculum aerophilum: PAE1646
Entry
PAE1646           CDS       T00073                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
pai  Pyrobaculum aerophilum
Pathway
pai03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAE1646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pai03032]
    PAE1646
DNA replication proteins [BR:pai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PAE1646
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C RCF1-5-like_lid RuvB_N AAA_assoc_2 AAA_14 AAA_22 AAA_16 Rad17 AAA_3 AAA_24 AAA_18 AAA_25 AAA_2 AAA_5 ResIII Mg_chelatase DEAD nSTAND3 PhoH AAA_28 AAA_11 AAA_33 AAA_19 AAA_30 SLFN-g3_helicase RNA_helicase AAA_7 TIP49 UBA_Rad5 ATPase_2 Cdc6_lid NPHP3_N TsaE DNAX_ATPase_lid ABC_tran Parvo_NS1 Viral_helicase1 bpMoxR DUF815 AAA_17
Other DBs
NCBI-ProteinID: AAL63627
UniProt: Q8ZWS2
LinkDB
Position
complement(963394..964353)
AA seq 319 aa
MSELFWFEKYRPRSFDEVVDLEEVKARLRQFVKAGNMPHLLFYGPPGTGKTTMALVLARE
LYGEYWRENTLELNASDERGINVIRERVKEFARTAPVGKAPFKLVILDEADNMTSDAQQA
LRRIMEIYAQNTRFILLANYVSGIIEPIQSRTVMIRFSPLPKEAVFARLRYIAENEGVKV
SDDALEAIYEFTQGDMRRAINALQIAATVSKAVTEEVVAKALGMVSPRLLRETLYEAVKG
SFGKAATQIYGFVADGGVGELEIIKQIHREMLRLDVQEYVKPEIAYIIAEAHYAILRGAH
GLTQIYGALAKVRRLLKSV
NT seq 960 nt   +upstreamnt  +downstreamnt
atgagcgagttgttttggtttgagaaataccgtcctcgttcttttgatgaggtggtggat
ttagaggaggttaaggctaggcttaggcagtttgttaaagccgggaatatgccccatctc
cttttctacggccctccgggcactgggaagactaccatggctttagttttggcgagggag
ctctacggggagtactggcgggagaatacccttgagctaaacgcctcagacgagaggggg
ataaacgtaattagagagagagtgaaggagttcgcgaggacggcgccggtgggaaaagcg
ccgtttaaattagtaatactagacgaggctgacaacatgacctcagacgcacaacaagca
ctccgcagaataatggaaatatacgcacaaaacacaagatttatactactggcaaattac
gtcagcggaattattgagcctatacagtcgcgcactgtcatgataagattctcgccgctt
ccgaaagaggccgtgttcgcacgtcttcgctatatagctgagaatgagggcgtgaaggta
tcagacgacgcgttggaggctatatatgaatttacacaaggcgatatgaggagggcgata
aacgcgttacaaatagcggccactgtaagcaaggccgtcactgaggaggtggtggcaaag
gctttgggaatggtaagccccaggctgttgagggagacactatatgaagcggtgaagggc
agtttcggaaaggcagcgacgcaaatatacggctttgtggcagacggcggcgtgggggag
ctggaaataattaaacagattcacagagaaatgctgaggctggacgtccaggagtacgta
aagccggagatcgcgtatataatagcggaggcgcattacgccatcttaaggggagcgcac
gggctgacccaaatatatggagcccttgcaaaagttagaaggcttttaaaatcagtatag

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