Pyrobaculum aerophilum: PAE2206
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Entry
PAE2206 CDS
T00073
Name
(GenBank) 3' exoribonuclease family protein
KO
K12589
exosome complex component RRP42
Organism
pai
Pyrobaculum aerophilum
Pathway
pai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAE2206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pai03019
]
PAE2206
Messenger RNA biogenesis [BR:
pai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PAE2206
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PAE2206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AAL64026
UniProt:
Q8ZVN0
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All DBs
Position
complement(1302800..1303624)
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AA seq
274 aa
AA seq
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MASISPYGKRFISYLRREQIRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLG
KTHVVAGVKVGLGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIR
HCGYVDFKKLAVEGGKAYVLWIDLYVINDDGNLIDVANLASVAALKNTQLPVVVKDEAGV
VKLDRNNKAPLPVDISKAPIAVSVGKIGNVLFLDPTFEEELSLDGRITFTFSEDKIVAAQ
KTLGYFTQSEIEAALNLALRGRDRLLEALKSALK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatttcgccctacggcaagcggtttatttcttacctccgccgggagcagata
aggaggttgttagccacgaagtacagagtcgacggcagagggccagagcagactagaaac
gtggagataaacgtgggcgttgtcaaaacggcggacggctcagccgaggtgaagctgggc
aagacgcatgtagtcgcgggggttaaggtggggctgggacagcccttcccagacgcgcct
gacgagggcgtcttggtggtcaacgccgaggttttgccccacgcctcgccgtatacagag
gtgggccctcccgacgaatttgccatagagctggcaagagttgtagaccgcggcattagg
cactgcggctacgttgactttaaaaaactggcagtagagggggggaaggcttacgtcctt
tggattgatctctacgtaattaatgacgacggcaatttaatagatgttgcgaacttggcc
tctgtcgccgcccttaaaaatacacaactgccagtggtggttaaagacgaggccggcgtt
gtgaaactagatcgtaacaataaggcgcctctgccggtggatataagcaaagcgccaatc
gccgtgtcggtggggaagataggcaacgtcctctttctagaccccacgtttgaggaggag
ctcagcttagacggcagaattaccttcacattctcagaggataaaatcgtcgcggcgcag
aagacgctgggctacttcactcagtcggaaatagaagccgcactcaatttggcgctgagg
ggacgggacagattactcgaggcgttaaaaagcgccctcaaatag
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