Pyrobaculum aerophilum: PAE2906
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Entry
PAE2906 CDS
T00073
Name
(GenBank) peptide chain release factor aRF subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
pai
Pyrobaculum aerophilum
Pathway
pai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PAE2906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pai03019
]
PAE2906
03012 Translation factors [BR:
pai03012
]
PAE2906
Messenger RNA biogenesis [BR:
pai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PAE2906
Translation factors [BR:
pai03012
]
Eukaryotic type
Release factors
PAE2906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
baeRF_family10
eRF1_3
acVLRF1
Ribosomal_L7Ae
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AAL64527
UniProt:
Q8ZU81
LinkDB
All DBs
Position
complement(1726549..1727715)
Genome browser
AA seq
388 aa
AA seq
DB search
MSFNRPPNGVYYIRSAVELRAFVNLLKKFKGYATTLITLYINAERPIPDVVNLLRSEWST
AANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQ
PINTFKYICDTAFHTELLEDQLHAGVVYGIVVIERGEAVIALLKGGQWEVVKSVEFFVPG
KHHAGGQSANRFKRQTEHLAEAFYKMVAEEANKIFLQIPTLKGIIVAGPGPTKEDFLEEG
GLDYRLKDKILAIVPACCANEYGVMEAIRNAQEQLKESEYVKAKEVMDKVMYYAVKKSEY
LVYGRERALKALEMGIADIIVIAEELGEDAVLEVIMKAEEKGIKVEVVPRGVEESKTLMQ
AFGGYVALLSTPVWVLEQQLSIAEAAQR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaacaggccgcctaatggcgtgtattacataagaagtgcggtggagctgagg
gcatttgtgaacttgctgaagaaatttaagggctacgcaactacgcttattaccctttac
atcaacgccgaaaggcccattcctgacgtggtaaacctcttgaggtctgagtggtctaca
gcggctaacattaaggataagacgacaagaacccacgtacaagacacgttggagagaatt
attaacaacctaaagggcgaggcgaaagcccccgagaacggcatggcggtttttgccggg
ttccacatgataaatcaggggaattatgaatgggtgtattacgtcgtgattccgccgcaa
cctattaacacctttaaatacatctgcgacactgctttccacacggagttgttagaggat
cagttacatgccggagtggtttacggaattgtggtaattgagaggggcgaggccgtcata
gccttattaaagggcgggcagtgggaagtggtgaagtctgtggagtttttcgtgcccgga
aaacaccacgcagggggtcagtcggccaaccgctttaagcgccagacggagcacttagct
gaggctttttacaaaatggtagcggaggaggcgaataaaatatttctccaaatacccacg
ttaaagggcataattgtggcggggccgggccccacgaaagaggactttctagaggagggc
ggtcttgactaccgcctaaaggacaaaatactggcaattgtgcctgcttgttgcgccaat
gaatacggcgtgatggaggctattagaaacgcccaagagcaattaaaagagagcgagtac
gtaaaggctaaggaggtaatggacaaggtgatgtactacgccgttaagaaaagcgagtat
ttagtatacggccgcgagagggcgttaaaggccttggagatggggatagctgatataatt
gtaatcgccgaggagttgggagaggacgccgtgttagaagtaattatgaaagcggaggaa
aaggggatcaaagtggaggtggtgcccaggggcgtggaggagtcgaagacgttaatgcaa
gccttcggcggctacgtggcgttgctctccactcctgtatgggtacttgagcaacagttg
agtattgccgaggccgcccagcgctga
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