Pyrobaculum aerophilum: PAE3329
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Entry
PAE3329 CDS
T00073
Name
(GenBank) transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
pai
Pyrobaculum aerophilum
Pathway
pai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAE3329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pai03021
]
PAE3329
Transcription machinery [BR:
pai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PAE3329
Prokaryotic type
Archaeal type
TFB
PAE3329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Zn_ribbon_tTFIIB
Zn_ribbon_3
Zn_ribbon_8
HTH_73
TetR_N
DUF7577
Lar_restr_allev
Zn_ribbon_RRN7
Sigma70_r4
Zn_ribbon_LysW
Ribosomal_S27e
Zn_ribbon_21
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AAL64842
UniProt:
Q8ZTC0
LinkDB
All DBs
Position
complement(1993374..1994270)
Genome browser
AA seq
298 aa
AA seq
DB search
MTRKLIFELEEYACPACGAVNDVIVDYERGQVICKSCGVVLKDGIADLGPEWRKPESSRA
YSGPIGSSIGDIEFGNVKVADKLKAISLKKFSRPISTPLERVESDVREFLESAKEKLSIP
KNVIEETVMLYKKLYDAGYKAPRLESYAAVLYFVLKKHGIAAVTLKKIIEELGIDRSNFI
SAYMELMSTANKLGIKPPRVDPRVYIPKIVSALGIGDEKSAEVQRIAVDILRYIISVPRI
RNGRKPQVLAAAAVFYACYIAGVEVTQKEVAKAADSTEGPVRELLKDLSDVIYVEVTV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtaagcttatctttgagctagaggaatacgcatgtcctgcctgtggggctgtt
aatgatgtaattgttgattacgagcgggggcaagtgatttgtaaaagttgcggcgttgtg
ttaaaagacgggatcgcagatctgggcccagagtggagaaagcccgaatcgtcaagggcg
tactcggggcctataggctcttctattggagatatagaattcggcaatgttaaagtggcg
gataaattaaaggctattagtctgaagaaattctcgcgtccaatttcaacgcctcttgaa
agggttgagtcagacgtcagggagtttttagaatccgcgaaggaaaaactcagtattcct
aaaaacgtcattgaagaaacagtgatgttgtataagaagctctacgacgctgggtataaa
gctcctaggcttgagagctacgctgcagtcctctacttcgtgttgaaaaaacacggcata
gcggccgtcacgttgaaaaaaatcattgaggagcttggaatagatcgctctaatttcata
tcagcgtatatggagttaatgagcacagcgaataagctaggcattaaacccccgcgggta
gatcccagagtctacattcccaaaattgtatcggcattgggtattggcgatgagaagtcg
gcggaggtacagcgcatagcagtggatattttgcgttatatcatatccgtgccacgtata
agaaacgggagaaagccgcaggtcctcgccgctgcagcggtgttttacgcatgttatata
gccggcgtagaagtaactcaaaaagaggtggccaaagcggcggattcaacagaggggcct
gttcgggagttattaaaagatctttcagacgtcatatacgtggaggtcaccgtgtag
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