Pyrobaculum aerophilum: PAE3563
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Entry
PAE3563 CDS
T00073
Name
(GenBank) DNA-directed RNA polymerase subunit E'' (rpoE2)
KO
K15171
transcription elongation factor SPT4
Organism
pai
Pyrobaculum aerophilum
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PAE3563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pai03021
]
PAE3563
03019 Messenger RNA biogenesis [BR:
pai03019
]
PAE3563
Transcription machinery [BR:
pai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PAE3563
RNA polymerase I system
PAE3563
Messenger RNA biogenesis [BR:
pai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PAE3563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
UPF0547
Zn_Ribbon_1
Zn_ribbon_11
Zn_ribbon_15
Zn_Ribbon_TF
Zn_ribbon_3
Zn_ribbon_IS1595
HypA
zf-RING_4
NRDD
OapC
Zn_ribbon_NUD
zf_UBZ
DUF7575
zf-ChsH2
Motif
Other DBs
NCBI-ProteinID:
AAL65005
UniProt:
Q8ZSV8
LinkDB
All DBs
Position
2134843..2135064
Genome browser
AA seq
73 aa
AA seq
DB search
MSTRKRTLSGYKACKRCKTVMPEDAKQCPNCGSEEFVFKWRGMIVVIDPQKSCIAKRLGL
EKPGIYALELVEE
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaggaagaggactttaagcggctataaggcttgtaagcggtgtaaaacagta
atgccggaggatgccaaacagtgccccaactgcggatctgaggagtttgttttcaagtgg
aggggcatgattgtagttattgacccccagaaatcttgtattgccaagaggctggggttg
gaaaagccgggtatttacgccttggagctagtggaggaatag
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