Paenibacillus sp. IHB B 3084: ASL14_01450
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Entry
ASL14_01450 CDS
T05348
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paih
Paenibacillus sp. IHB B 3084
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paih03032
]
ASL14_01450
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_01450
Enzymes [BR:
paih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ASL14_01450
DNA replication proteins [BR:
paih03032
]
Prokaryotic type
DNA Topoisomerases
ASL14_01450
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASL14_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
MACPF_b-prism
Toprim_3
Lar_restr_allev
Zn_ribbon_recom
HypA
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ALP35039
UniProt:
A0A0S2S014
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All DBs
Position
complement(317069..319171)
Genome browser
AA seq
700 aa
AA seq
DB search
MADSLVIVESPSKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRGK
GSILKELKDARKKVKKVYLAADPDREGEAIAWHLAHALDLDDTADCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIILDREN
EINEFVPEEYWTITAKLAIKDSTFEAKFHQLRGKKKELSSEADVQEVLEAIGKSSYKVRD
VKEKERLRNPSPPFTTSSLQQEAARKLNFRASKTMSVAQQLYEGVDLGKEGTVGLITYMR
TDSTRIAVSAQEEAKEFIIQKYGEAFVPESPRQYSKKAANAQDAHEAIRPTSALRDPETV
KPFMSRDQFRLYKLVWERFMASQMASAIMDTLSVDIEAGETIFRAAGSKVRFPGFMKVYV
EGNDDGKTEEDRLLPPLKPGDKLKKESVEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFFPTELGELVIEQMEEFFPEILNVEFTANMEGDLDHVEEG
VGDWVKVLSDFYESFEKRLEVAEEEMKEIEIKDEESDVICDKCGSTMVYKLGRFGKFLAC
SAFPDCRNTKPIVKDIGINCPTCGEGHVVERRSKKGRIFYGCDRYPECDFVSWDKPSIKP
CPSCGGLMVEKRTKQGTKLNCTVCDHSEMLEDSDEGVETS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcactcgtcatcgtggaatcgccttccaaggcgaagacgatcggcaaatac
ttgggcagtaaatatatcgtcaaggcttccatgggtcatatcagggatttgccaaagagt
cagatcggcgtagaggtcgaaaatgattttaatcccaaatacattaccattcgaggtaaa
ggctcgattttgaaagaattaaaggatgccagaaaaaaagtaaaaaaagtatatctagcg
gctgacccggatcgcgaaggcgaagctatcgcttggcatttggcgcatgcgctggatctg
gacgatacagcagactgccgcgttgtatttaatgaaatcacaaagcaggcggttaaggat
gcatttaaaacaccacgcaaaatcaatatggatttggtcaatgcccaacaggcacggcgg
atccttgatcggcttgtcggctacaaaatcagtccattgctttggaagaaggtaaagaag
ggcttgtccgcagggcgcgtgcagtcggttgccgtgaaaattatcctggaccgggaaaac
gagattaatgagtttgtaccggaagagtattggacgatcacagctaaactggcgattaag
gacagtacctttgaggcgaaattccatcagcttcgtggcaaaaagaaagagctctccagc
gaagcggatgtacaagaagtgctggaggctattggcaagtcgtcttacaaggttcgtgat
gtgaaagagaaagagcgtttgcgcaatccttctccaccattcacgactagctccttgcag
caagaggcggctcggaaactcaacttccgtgcatccaaaacgatgtccgtggcccagcag
ttgtatgagggtgtggacttgggcaaagaaggaaccgtgggtctgattacgtatatgcgt
acggattccacacgaatagctgtttcggcccaagaggaagcgaaggaattcattattcag
aaatatggcgaagcttttgtacctgaaagtcctcgtcaatattccaaaaaagcggccaat
gcccaggatgcgcatgaagcgattcgtccaacctccgcgttgcgtgacccggaaacggtt
aagccgtttatgagccgggatcagttccgtttgtacaaactggtatgggagcgttttatg
gccagccagatggcttccgctattatggataccttgtccgttgatattgaagcgggtgag
actatattccgggcagctggctcgaaggttcgttttccaggcttcatgaaagtgtatgtg
gaggggaatgacgatggaaaaaccgaagaagataggctgctgccgccgcttaaacctggc
gacaagctgaaaaaggaatcggttgagccgaagcagcatttcacgcaaccgcctccccgt
tatacagaggcacgactggtgaaaacgctggaagaactgggtatcggacgtccgagtacg
tatgcaccgacactggaaactattcagaagcgtggctatgtcgccattgaagagaagaag
ttcttccctacagagctgggagaactggtcatcgagcagatggaggaattctttcctgaa
attctgaacgtggaattcacggctaatatggaaggtgatcttgaccacgtagaagaaggc
gtaggagactgggtcaaggtcttgagtgacttttacgagtcgtttgagaagcgtctggaa
gttgcagaggaagaaatgaaggaaattgagatcaaggatgaagaatccgatgtcatttgt
gacaaatgtggcagcacgatggtgtataagcttggccgctttggtaaatttctggcctgc
tcggcattcccggattgccgtaatacgaagccgattgtcaaggatatcggaataaattgt
cctacatgtggtgagggccatgttgtggaacggcggagtaaaaaaggacgcatcttttat
ggatgtgaccgttatccggaatgcgattttgtatcctgggataaaccgtccattaagcct
tgtccaagttgtggtggcctaatggtcgaaaaacgtaccaaacaaggaacgaagctcaac
tgtaccgtctgcgatcacagtgaaatgttggaagatagcgacgagggtgtagagacttca
taa
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