Paenibacillus sp. IHB B 3084: ASL14_03160
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Entry
ASL14_03160 CDS
T05348
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paih
Paenibacillus sp. IHB B 3084
Pathway
paih03030
DNA replication
paih03430
Mismatch repair
paih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASL14_03160
03430 Mismatch repair
ASL14_03160
03440 Homologous recombination
ASL14_03160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paih03032
]
ASL14_03160
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_03160
Enzymes [BR:
paih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASL14_03160
DNA replication proteins [BR:
paih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASL14_03160
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASL14_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
HROB
Motif
Other DBs
NCBI-ProteinID:
ALP35326
UniProt:
A0A0S2S0T1
LinkDB
All DBs
Position
complement(685225..688902)
Genome browser
AA seq
1225 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARTAELVKQASAYGMKALALTDHGVMYGAIPFYRACVENGI
KPIIGCEAYMTAGSRKERGSRKDQPIYHLILLAKNKTGYQNLMKLCSIGHLEGFHYKPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEARRAAERYRNIFGDDFYLELQDHGLS
EQKRVNPLLIALAKELDIQLVATNDVHYLTEPDADVQDVLICIGTGKTVDDEERLRIPTR
QLYLKSQEEMTRLFPHVAEAIDNTVRIAEKCELELEFGQSILPEYRPLPEGMTPSSYLSS
LCVQGLERRYGSDLAWEQPEQRERLEQRLSYELNTIDSMGFSDYFLIVWDFIAFAHKHNI
ATGPGRGSSAGSLVAYVLNITNVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVID
YVVQKYGNEHVAQIITFGTLAARAAVRDVGRALNVPYGEVDKAAKLIPAQLGINIRHALE
ITPELKTLYETKPKTRELLDMAIKVEGMPRHASTHAAGVVISRTPLTDAVPLQEGSEGVP
LTQYSMENLERIGLLKMDFLGLRTLSIIERCMRWITEEHGETPDFSRIPDNDPHTYDMLG
KGDTGGVFQLESAGVRRVLKDLKPSVFEDIISVLALYRPGPMGFIPNFIQAKHGEIEVHY
PHPDLEPILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFV
EGSVKQGYTEEEAGKVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGSHRKVAEYVVECRRMDMAVLPPDVNESGVLFTPLQEGNIRFGLAAIKNVGTQAMES
ILAVRKERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDSLPGHRAQLLAMLDETVDAA
VKWRKERDDLQIDMFGFVEMPNWDIEYPEVPKFSAGQQLELERELLGLYLSGHPLDDFEP
LLESSDAERLMELGDVPDEAVVVTAGMVVSLKTITTKQGKAMAFIELEDQIERCEVVLFP
EVWKRSHQWIEKGALLALRAKMQHQDEHFKLLADEAAPLAEDSLARLLQRRRAGARSSAA
AGSATGGPGGGTPRVPSRPSAAGASAQPTTPQTVPPVSTARPATGTTPHATEAAPGEQAS
APRSSEPTARQRVFVKITRQAEEDASLLVSLKALLQEHPGALPTVLFYESSQRLLALSDA
YSIKPSPQLFDRMESMLGAGTVKVK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgtgcatttgcatgttcatagcgagtacagcctgctggacggcgcggct
cgtaccgcggagttggtcaaacaggcatcagcttatggaatgaaggcactggcccttacg
gatcacggggttatgtatggtgccattcctttttatagagcgtgtgtggagaacggcatt
aagccgattatcgggtgtgaggcctatatgacggcaggctcgcgcaaggagcggggcagc
cggaaggaccagcccatatatcatttaattttgctcgccaaaaataaaacaggctatcaa
aatctgatgaagctgtgctctatcggccatttggagggctttcactacaagccgcgaatc
gacatggaagcgctggctgcccatcatgaaggcatcatatgcttgagcgcatgtttgggc
ggtgaagttccgcagcatttgctgcatggtcgggaagccgaggcaaggcgggcagcggaa
cgctaccgcaacatttttggcgatgatttttatctggagcttcaggatcacggtctgtcg
gagcaaaagcgcgtaaatcctctgttgatcgcgttagcgaaggagctggatattcagctg
gtagcgacgaatgacgtgcattacctgaccgagccggatgcagatgtacaagacgttctg
atctgcattggaactggcaagacggtcgacgacgaggagcgcttgcgcataccgacccgt
cagttgtacctgaaaagccaggaggagatgactcgtttgttcccccatgtggcggaagcc
atcgacaatacagtgcgtattgctgaaaaatgcgaattggagctggaatttgggcaatcc
attttgcctgaatatcgtccgctgccggaaggcatgactccttcgtcctatctgagcagt
ttgtgtgtgcaagggctggagcgtcgttatgggagtgatctggcgtgggaacaaccggag
caacgagaaaggctggagcagcggctcagttatgagctgaacacgattgacagcatggga
ttcagtgattattttctgatcgtgtgggattttatcgctttcgctcataagcataatatt
gctaccggcccgggacggggttcctcggcgggcagtctggttgcctatgtgcttaacatc
acgaatgtggatccgatgaaatataacctgctgtttgaacggtttctgaatcctgaacgg
attagcatgccggatatagatattgatttcagcgatgaacgacgggatgaggttatcgac
tatgtggtgcagaagtacggtaacgagcatgtagcgcagattattaccttcggaacgctg
gcggcaagagccgcagtgcgtgacgttgggcgtgcgttgaatgtaccgtatggcgaagtg
gacaaggcggccaagctgattccggcgcagctcgggattaatatccgtcatgcgcttgag
atcaccccggagctgaagacactgtatgaaaccaagcccaagacgcgcgagctgctggat
atggcaattaaagtagaaggcatgccgcgtcatgcctcaacccatgcggcgggtgtcgtt
atttcgcggactccgctgaccgatgcagttccgcttcaagaggggagtgaaggggttccc
ctgacgcaatactcgatggaaaatctggagcggatcggtttgctgaaaatggattttctt
gggctgcgcaccctttctattattgaacgctgtatgcgttggattaccgaagaacatggg
gaaacgcctgattttagccgcattcctgataatgacccacatacctatgacatgctgggc
aaaggcgacacaggcggtgtgttccagttggagtcggcgggggtacgccgtgtgctcaag
gatctaaagccaagtgtgttcgaggatattatttctgtattggccttgtatcgtccgggt
ccaatgggcttcattcctaactttattcaggccaagcacggggagattgaggttcattat
ccgcatcctgatctggagcccatcttgaaggatacgtacggcattatcgtgtatcaggag
caaatcatgcagattgcttcgcgcatggcgggcttttccctgggagaagccgatctgctg
cgtcgcgccgtgtccaagaaaaagcgcgaagtgctggatcttgagcgaggtcattttgtg
gagggcagtgtcaagcagggttacacggaagaggaagccggaaaagtctacgatatgatc
gtccgttttgcggactatggatttccacgtgcacatgcggctgcttatggtgtgctggcg
ttccagacggcgtatctcaaagcccattatccggtgcagtttatggcttccatgctgaca
gcggtgatgggtagccaccggaaagtggcggaatatgtcgtcgaatgccgtcgtatggat
atggcagttctgccacctgatgtgaacgaaagcggggtgctgtttaccccgttgcaggaa
ggtaatatccgcttcggactggccgcgattaaaaatgtcggcacgcaggcgatggaaagt
attctcgccgttcgcaaggagcgtccttttgacagcttgctcgatttttgtcgccgtgtg
gatttgcgggtgtgcaataagcgggtgatcgaatcgctcattcaggcaggggcttttgac
tcgttgccgggtcatcgggcgcagttgcttgccatgctggatgaaacggtggatgcagcg
gtcaaatggcgcaaggaacgtgacgatttgcaaattgatatgtttggttttgtggaaatg
cctaactgggatatcgaatatcccgaagtaccaaaattcagtgcaggtcagcagttagag
ctggaacgtgagttgttgggactgtatctgtccgggcatccgctggatgattttgagccg
ttactggaaagcagcgatgcggagcgactgatggaattgggcgatgtgccggatgaagcg
gttgtcgtaaccgcaggtatggttgtgtcgctcaagacgattacgaccaagcagggcaag
gctatggcctttatcgagctggaggatcagattgagcgctgtgaggttgtgttgtttccc
gaagtgtggaagcgaagccaccagtggattgaaaagggagcgttgcttgcgcttcgtgcc
aaaatgcagcaccaggacgagcatttcaagctccttgcggacgaggccgcgccactggcg
gaggattcgctggcgcggcttctccagcgccggcgtgccggagcgcgttcgtccgccgcg
gctggctctgccactggcggccccggcgggggaacgccacgtgtgccgtcgaggccgtcg
gcagccggggcgtctgcgcagccgactacgccgcaaacggtcccgcccgtttcgacggct
cgcccggccacgggcactacgccgcacgccacggaagcggctcccggcgaacaagcctcg
gctccgcgtagttcggagccgactgcccgtcagcgggtgtttgtcaaaatcacccgccag
gccgaggaggacgccagcttgctggtcagcctcaaggcgctgctacaggaacatcccggt
gcattgcctaccgtacttttttatgagagcagccagcgtttgctggcgttgagtgatgct
tacagcatcaagccttcgcctcagctttttgaccggatggagtcgatgctgggggcaggc
acagtgaaagtcaaataa
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