Paenibacillus sp. IHB B 3084: ASL14_11210
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Entry
ASL14_11210 CDS
T05348
Name
(GenBank) MBL fold metallo-hydrolase
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
paih
Paenibacillus sp. IHB B 3084
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ASL14_11210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paih03021
]
ASL14_11210
03019 Messenger RNA biogenesis [BR:
paih03019
]
ASL14_11210
Transcription machinery [BR:
paih03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ASL14_11210
Messenger RNA biogenesis [BR:
paih03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ASL14_11210
U7-dependent histone pre-mRNA processing factors
ASL14_11210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Lactamase_B_3
Anti-Pycsar_Apyc1
RMMBL
DUF6289
Motif
Other DBs
NCBI-ProteinID:
ALP36638
LinkDB
All DBs
Position
complement(2435762..2437126)
Genome browser
AA seq
454 aa
AA seq
DB search
MMMTKLRIWGGAGEHGRSCYVLEGKQHRIMLDCGVKKEGTGQYPVFLPQEAERLTAVLLS
HAHEDHSMALPLLYKYGYRGEVWTTKATAEQLGSYFRSWHTYVESRGGKLPYDERDIESI
AYRYLEDEAPSGVWQEACPGVRIMWGRSGHLAGAVWYMVDMEGKRLFFSGDYSRESELLA
ADAPEPNLADISIMDNAYGMDIDPQPVKLERLRAGMGQILSSGGHVLLPVPAFGRGQELI
VWASEQFPEQAMIVEPDIWQGLQRLSRLKEWLRPEVPARIERVLHSGRIFVPRDAAERVR
LLEQNAAAMIVTGDGMMDSPRARWYYQYLSDHPPSAGDGEGSGKSNHNGVILTGHASSGS
FGKHLLDCTNQKTGQKTDQNDRCIVRHLIYKVHQGISDVRLMLKELPGKQVVLVHAPKPQ
TDLVRDELMREGWTEHESSVKVIHSLEPGATLNV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaccaagcttcgaatttggggcggtgcgggcgaacacggccgctcctgctat
gttttggaaggaaagcagcatcgtatcatgctggattgtggcgtgaaaaaggaaggaacc
gggcagtatccggtttttctgccgcaggaggcggagaggctgaccgctgtattgctgtct
catgcacatgaggatcattcaatggcgctccccttactgtataagtatggataccgggga
gaggtttggacgacaaaggcgaccgccgagcagttgggttcctattttcgctcctggcat
acttatgtagaatcgagaggcggcaaattgccatacgacgaacgggatatcgaatccata
gcttaccgctatctggaggatgaagcgccgtcaggagtatggcaggaggcttgtccgggt
gtacggatcatgtgggggcgtagtgggcatttggctggagcagtgtggtacatggtagat
atggaaggaaagcggttgttcttttcgggagattacagccgcgaatccgaactgctcgct
gccgatgcaccggaacctaatctggccgatatctccattatggataatgcttatggcatg
gatatagacccgcagcctgtgaagctggagcggctgcgggccgggatgggacagatattg
tcttctggtggtcatgtgctgcttccggtacccgcctttggccgggggcaggagttgatt
gtgtgggccagcgagcagttccctgaacaagcaatgattgtagagccggatatatggcag
ggattgcagcgcttgagccgtttgaaagaatggctacgcccggaagtacctgcgcggata
gaacgtgtgctgcacagtggccggatctttgtgcctcgtgatgctgcggagcgagtacgg
ctgctggaacagaatgctgcggcaatgatcgtaaccggggacggcatgatggattcgcca
cgggcgcgctggtactatcagtatttatcagatcatccgccgagtgcgggggatggcgaa
ggtagcggaaaaagtaatcataacggagttattttaacgggacatgcttcgagcggttct
tttggtaaacatctgctggattgtacgaatcaaaaaacgggtcagaaaacagatcagaat
gaccgttgtatagttcggcatttgatttacaaggtgcatcaggggatatcggatgtgaga
ctaatgttgaaggagttgcctggtaaacaggttgtgctcgttcatgcgcccaagccgcag
actgatcttgtgcgtgacgagctgatgagagaaggttggaccgaacacgaaagctctgta
aaagtcattcactctttggagccgggcgcaacgttaaacgtttag
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