Paenibacillus sp. IHB B 3084: ASL14_15355
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Entry
ASL14_15355 CDS
T05348
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paih
Paenibacillus sp. IHB B 3084
Pathway
paih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASL14_15355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paih03021
]
ASL14_15355
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_15355
Enzymes [BR:
paih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASL14_15355
Transcription machinery [BR:
paih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASL14_15355
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASL14_15355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALP37365
UniProt:
A0A0S2S6N2
LinkDB
All DBs
Position
3361090..3364704
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNQPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSAEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGSFYLTMDNKEEEGSNMILRNMNEAISAYQRGTAGLHARVAIP
VKALNKTSFTEKQQDAMLITTVGKIIFNEIFPASFPYINDATRANLLYGTAEEFFVYEKG
VNLTEAIQNAPQANGVGKDYLGNIIARCFETYHTTETAVILDKIKQLGFTYSTRSGVTVA
VSDVIVPVEKQGILKGSEDKAQVVTNQYRRGLITNEERYDRIIDIWSKAKDDITEVLMKS
MDRYNSIMMMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRLEGRYCFETVRHPETGEILAGRNELIDSDKAEAIVKAGVQKLQIRSVLSCRAKHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGTVKEIREGKDRREIDIQGEAETKTYSVTYGSRLRVSEGMTVEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
LDAGNTTLLPGSFVDVHEYENANKTAILSGQEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVIIGKLIPAGTGMNRYRSVKFAQPEGEQPSSEELEP
ISAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaatttcgaatatatgaaaatcgggcttgcttcccccgaaaagatt
cgttcttggtcccgcggagaagtcaaaaaaccggagacgattaactatcgtacgcttaaa
ccggaaaaagaaggactattttgcgagaaaattttcggacctacgaaagactgggaatgt
cattgcggtaagtacaagcgtgtgcgctataaaggtgttgtctgtgaccgttgtggcgta
gaggttacccgcgctaaggttcgtcgtgagcgtatgggtcacatcgagctggctgcccct
gtatcgcatatttggtactttaaaggcattccgagccgtatgggtcttgctcttgatatg
tctccaagatctctggaagagatcatttacttcgcatcttatgttgtaactgatccagga
gatacgccattggagaaaaagcaactcctgtccgagaaagaataccgcagctaccgtgaa
aaatacggctacggatttcaggcaggtatgggtgctgaagcggttaagaagctccttcaa
gatttggatatagacaaagaactagaattcctcaaagaagagttgcgtacagctcaagga
caacgtcgcaaccgtgcgatcaagcgtcttgaagtgattgaggcgttccgtaactccggc
aaccagccagactggatgatcatggacgtgttgcctgttattcctcctgagctccgtccg
atggtacagctggatggtggacgttttgctacctctgatctgaatgacttgtaccgccgt
gttatcaaccgtaacaaccgtctgaaacgcttgctagatctgggtgcaccggatattatc
gtacaaaatgaaaaacggatgctgcaggaagctgttgacgctctgatcgataatggtcgt
cgtggccgccctgttacaggtccgggtaaccgtcctttgaaatccctcagccatatgctg
aaaggtaaacaaggacgcttccgtcaaaacttgctcggaaaacgtgttgactactccggt
cgttccgttatcgttgtaggtccgtacttgaaaatgtaccaatgcggtttgccgaaagaa
atggcattggaactgttcaaaccttttgtcatgaaagaacttgtgaacaaaggtcttgca
cacaacattaagagcgcgaaacgtaaagtagagcgcgtgagcgcagaagtatgggatgtg
ctcgaagaagtaatcagggagcatccggttcttctgaaccgtgcccctacgctgcataga
ctcggtatccaggcgtttgaaccgattttggttgaaggtcgtgcaatccgtttgcatccg
ctcgtatgtacggcatataatgccgactttgacggtgaccaaatggcggttcacgttcca
ttgtctgcggaagcccaagcagaagctcgtttgctcatgctggcatccggtaacattttg
aatccgaaagacggcaaacctgttgttactccttcccaggatatggtccttggttctttc
tatctgactatggataacaaagaagaagaaggcagcaacatgatccttcgcaatatgaac
gaggctatatcggcttaccagcgcggtacagcgggtcttcatgctcgtgtagctattccg
gttaaagctttgaataaaacgagctttacggaaaaacaacaggatgcaatgctgatcacc
acggttggtaaaattatctttaatgaaattttcccggccagcttcccgtacatcaatgat
gctacccgtgccaacctgctttatggtactgctgaggagttctttgtttacgaaaagggt
gtaaaccttacagaagcgattcaaaatgctccgcaagctaacggggtaggtaaggattac
cttggtaacattattgcccgttgctttgaaacttaccatacaacagaaacagctgtgatt
ttggataaaatcaaacagcttggctttacgtattctactcgttcaggtgtaactgttgct
gtatcggacgttatcgtgccggtggaaaaacaaggaattcttaaaggttctgaggacaaa
gcgcaagtcgtaacgaatcaataccgtcgtggtttgattacgaatgaggaacgctatgac
cggattattgatatttggtccaaagcgaaagatgatattaccgaagtgctgatgaagtcc
atggatcgctacaactcgatcatgatgatggtagactccaaagcgcggggtaacaaatca
cagattacccagctcggcggtatgcgcggtctgatggcgaatccatccggtcgtattatc
gagctcccaattaaatcgaacttccgtgaaggtttgacagtactcgagtacttcatctcc
actcacggagcgcgtaaaggtttggcggatacagcgcttcgtacggctgattcaggttac
ctgactcgtcgtcttgtcgatgtagcgcaggatgttatcgtgcgtgaagaagattgcgga
acggacaaaggctttacagtaagccgtattcaggacggtaaagaagttattgaggatctg
tatgaccgtctggaaggtcgctattgctttgaaacggtacgtcatccggagactggcgag
attttggctggccgtaacgaattgatcgattccgacaaagcggaagcaattgttaaagct
ggtgtacaaaagcttcaaattcgttcagtactgagctgtcgtgccaaacatggcgtctgc
aagaaatgctacggtcgcaatctggctactggcaaacacgttgagattggtgaagcagtt
ggtattatcgcggcacaatccatcggtgaaccaggaacccagcttacaatgcgtacattc
cacacaggcggtgtagcgggcgacgatattacacaaggtttgccgcgtattcaggagctt
ttcgaagcacgtaatcctaaaggtcaggcaaccatcagtgaaattgacggtacagttaaa
gaaattcgtgaaggtaaagatcgccgtgagatcgatattcagggtgaagctgaaacgaaa
acttattcggttacgtatggttctcgtctgcgcgtaagcgaaggcatgactgttgaagcc
ggggatgaactgacagacggttcaatcgaccctaaagaaatgctgcgcattaaaggtatt
cgcggggtacagaactatatccttcaggaagttcaacgcgtataccggaatcagggcgta
gaaatcaatgataagcacgtggaagttatgattcgtcaaatgttgcgtaaaatccgtatc
cttgatgcggggaatacaacgctgcttccaggctcctttgttgatgtgcacgagtatgaa
aatgcgaacaagacagcaattctcagtggccaagagccagcggtagccaaaccggttctg
cttggtatcaccaaggcatctctggaaactgactccttcttgtcagcagcttccttccaa
gagaccactcgcgtgctgaccgatgcggctataaaaggcaaagtcgatcagttgcttggt
ctgaaagagaacgttattattggtaagttgatccctgcgggtacaggtatgaatcgttac
cgcagtgtgaaatttgcccaaccggaaggggagcaaccctcgtccgaagaactcgaaccg
atttcggccgagtaa
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