Paenibacillus sp. IHB B 3084: ASL14_15525
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Entry
ASL14_15525 CDS
T05348
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paih
Paenibacillus sp. IHB B 3084
Pathway
paih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASL14_15525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paih03021
]
ASL14_15525
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_15525
Enzymes [BR:
paih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASL14_15525
Transcription machinery [BR:
paih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASL14_15525
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASL14_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
PASTA
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
ALP37398
UniProt:
A0A0S2S6R3
LinkDB
All DBs
Position
3383743..3384687
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFATVPGVKEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGVVTAGDIRADSDVEI
LNPDLHIATLGPGSRLHMRIFANRGRGYVKQDRNKRDDQPIGVIPVDSIYTPISRVNYGI
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHVMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagacggtagacgtcaatgatgatggcacctat
ggaaaattcgtagtagaaccgctggaacgcgggtacggtacgacgctaggaaactcgctt
cgccgtattctgttatcctcattaccgggggcagcagtcacatcggttcagatcgatgga
gttttgcacgaatttgcaacggttcccggtgtgaaggaagacgtaacggagatcatactg
aacctgaaagctttatcgcttaaaatccactcggatgaagagaaggtactcgaaatcgat
gcggaaggcgaaggagttgtaacggcaggagatatccgtgcggacagtgatgtggaaatt
cttaatccggatcttcacattgctacgctcggaccgggttcgagacttcacatgcgtatt
ttcgccaatcgcggtcgcggttacgttaagcaggatcggaataaacgtgatgaccagccg
atcggcgtcattcccgtcgactccatctacactccgatttcacgcgtgaactatggcata
gaaaatacgcgtgtcggccaggttacgaattatgacaagctgacacttgaggtttggact
gacggaagtatccgccctgaggaagcagtaagccttggagcaaaaattttgaccgagcat
gtgatgttgttcgtgggtctaaccgacgaagcaaaagatgcggaaattatggtcgaaaaa
gaagaagacaagaaagaaaaagttcttgaaatgacgatcgaagagctggatctctccgtc
cgttcctataactgccttaagcgcgctggtatcaatacggtacaagaactcactactaaa
tctgaagaagatatgatgaaggtccgcaacctgggccgcaaatctttggaagaggtacaa
gagaagctcgaggaacttggtttaggacttcgtacggaagaatag
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