KEGG   Paenibacillus sp. IHB B 3084: ASL14_16800
Entry
ASL14_16800       CDS       T05348                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03090  RNA polymerase sigma-B factor
Organism
paih  Paenibacillus sp. IHB B 3084
Brite
KEGG Orthology (KO) [BR:paih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paih03021]
    ASL14_16800
Transcription machinery [BR:paih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ASL14_16800
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 Sigma70_ECF HTH_38 HTH_Tnp_ISL3 GerE Cyclophil_like2 HTH_50 HTH_29 KORA Lyase_1 MarR_2 HTH_10 DUF1492 TnsD HTH_24 HTH_28 Phage_antitermQ ELMO_ARM
Other DBs
NCBI-ProteinID: ALP37611
UniProt: A0A0S2S7H9
LinkDB
Position
3694359..3695132
AA seq 257 aa
MNEKVTPPESMDEAVGLIWEYQQTKDNEIATVLIRKYEPMVKMAAGKISRNRPDLYEDLY
QTGQMALIRLLQQYDISLGIPFEPYAMKSMLGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPNVNEIAEYLDLTVEETIEVLAGRECYHYVSLDSPLSQEESAATLGEL
ISSDANDYDTVEKRMDLQQALSQLKEQEQKVLLLAFQDGQSQRAIAQTLGVSQMSVSRIQ
KRATEKLKQIMSNSSIS
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaatgaaaaggtaactcccccggagtcgatggatgaagccgttggtctaatctgggag
taccagcaaaccaaagataacgagattgctaccgtgctgatccgcaagtatgagccaatg
gtcaagatggctgccgggaaaatctcccgtaaccgccccgacttatacgaggatttatac
caaaccggtcagatggctttgatacgtctgcttcagcaatacgatatcagcttgggaatc
ccctttgaaccgtatgctatgaaaagtatgctgggacatatgaaaaattatttacgcgac
aaatcctggtacattcaggttcctcgccgcatcaaggaaaagggtgcgctcgttcagcat
gccatcgacgaactaaccgttaaattggaacgttcgccgaatgtgaacgagattgcggag
tatttggaccttaccgtagaggaaacgatcgaagtgctcgcaggtcgtgagtgctaccat
tatgtgtcattggattcccctttatcccaggaggagagtgcggctacgttaggcgagctt
atcagctcagatgccaacgactacgacactgtggaaaaacgaatggatttacagcaagcc
ctaagccaactgaaagagcaggaacagaaggtgcttcttctggcatttcaggatggtcaa
tctcaacgtgcgattgcgcagaccttgggcgtatcgcagatgagcgtatcccgcatccag
aagcgggcaaccgagaagctgaaacaaatcatgtctaattcttctatctcatga

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