Paenibacillus sp. IHB B 3084: ASL14_19815
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Entry
ASL14_19815 CDS
T05348
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paih
Paenibacillus sp. IHB B 3084
Pathway
paih00040
Pentose and glucuronate interconversions
paih01100
Metabolic pathways
paih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ASL14_19815
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ASL14_19815
Enzymes [BR:
paih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ASL14_19815
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Gp18_domIII_N
Motif
Other DBs
NCBI-ProteinID:
ALP38094
UniProt:
A0A0S2S8Q5
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All DBs
Position
complement(4331192..4332475)
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AA seq
427 aa
AA seq
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MKKRFSLGIAAALLFTTLAPVGTPAHAAGDIGKEVLGSKNGWAAFSTGTTGGSAATASNI
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINANVDDNNKPLGLNDYKDPKYDFDAYLKAY
DPSKWGKKLPSGTLEKAREASQKNQASRVVIDIPSNTTIVGLGSDAVINGANFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDTITINGATHVWVDHNTFNDGSHPDSG
NGTFYGQEYQHHDGLLDVINQGDLVTASYNHFYDHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPSLYIWGAGKSSKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKAEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggcattgcagcagctctgctgttcactacccttgctcct
gttggcactcccgctcatgcggcaggcgatattggtaaggaggtgctcggcagcaagaac
ggatgggcagccttttctacaggcacgacaggcggatctgcagccacagcttccaatatt
ttcactgtaacaaatcgcaaacaacttgtggatgccttaggtaaaagcagtaatacaact
cctaaaatcatttatgtcaaaggcacgatcaatgccaatgtcgatgacaataacaagccg
ttaggattgaatgattacaaggaccctaaatatgattttgatgcatacctcaaagcatat
gatccatctaagtggggtaaaaagcttccgtctggcacattggaaaaggcacgtgaggcc
tcacaaaaaaatcaggccagtcgtgtcgtcattgatattccgtccaatacaacgattgtt
ggtctgggtagcgatgccgtcattaacggcgcaaacttccaactgaaaaaagggacagac
aacgttattatccgtaatattgaattccaggatgcctacgattatttccctcagtgggac
ccaactgacggtagtacaggcaactggaattcggaatatgacaccattacaattaatggc
gccacacatgtatgggtagaccacaataccttcaatgatgggtctcaccccgatagcgga
aacggcaccttttacggtcaagaataccagcatcatgatggacttctcgatgtgattaac
caaggtgatctggttactgcttcttacaatcacttttacgatcatgataaaacgtcgatt
attggcaacagcgacagcaaaacagcagatgaaggggctttacgtgtaaccctgcatcac
aattattatgaaaacacagtacaacgcacaccacgcgtgcggtatggacaagtacatctg
tacaacaattactatacaggtgatgtaaaacgctccgaatatccttcgctgtatatatgg
ggcgcaggtaaatcctccaaaatctttgccgaaaacaatgtcattgacgttgccggttta
tctgcagctaaaatcgtaactgtttttggaggcaccgccctgtccgacacaggcactctc
ctgaatggacaagccgtaaatgcaggctccagtgcgggtcttagctcttctgtaggctgg
aaaccatcgctgaacgataagatttccccatccgccagcgtgaaggcagaagtcacttcc
caagccggttccggcaagctgtaa
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