Paenibacillus sp. IHB B 3084: ASL14_21320
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Entry
ASL14_21320 CDS
T05348
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
paih
Paenibacillus sp. IHB B 3084
Brite
KEGG Orthology (KO) [BR:
paih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paih03400
]
ASL14_21320
Enzymes [BR:
paih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASL14_21320
DNA repair and recombination proteins [BR:
paih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ASL14_21320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_30
DUF2249
DUF5956
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ALP38337
UniProt:
A0A0S2S9E0
LinkDB
All DBs
Position
4653819..4657913
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AA seq
1364 aa
AA seq
DB search
MISTSSTNGIPKPEGSMWSDDQWRAISESGNNMLVAAAAGSGKTAVLVERIIRKIVDPRL
GFSVDRLLVATFTKAAAAEMRQRIREALERVLEQEPDSEHVRRQLSLLNRASITTLHSFC
MEVIRRHYQAIPLDPGFRIMNEHETELLRQELLEELFEEKYEANDEGSTFRRLVDWFSGE
RTDDAMYVLVQRLYDFSQSHPWPEHWLRETAAAFRVEDVAALGETPWVRSILADAALSLR
GAASLLEQAYETAMQPGGPAPYAVTLQEDAAMVKGLLQELETQPWASLYDHFQIAAFGKL
KPVKKDQTEPALQERVKALREAAKKMITDMKASLFGRRAEAYLEELHGAAPLMDALVETV
ILFGERFQQHKQSKGMVDFGDLEHYCLKILRHPDSTPHRLLPSDAALEYKEQFDEVLLDE
YQDTNTVQEDIVRLVSREEPGNRFMVGDVKQSIYRFRLAEPDLFLNKYQRYGMQEQEEGF
LIDLARNFRSRVEVVDAVNLVFRQIMSVDVAEIEYDERAWLAHGASYPEQTQKDATSPYA
PELLLVDKGGRGLSEAPELSETGDESALQEGEMAELAELETAQLEARAIAQRIKELTGDT
GQPLLIYDKGLKAMRPAVFGDIVILLRSASVWAPLIVEELRLEGIPASGEQTTGFFKATE
VEVMLSLLHIIDNPQQDIPLASVLRSPIVGLTEDELAQIRLQKPDGLFYSALLAAAEADP
TQDSENGTSSDMLELDLFAGDSTDASDMDDRNSGNTLPDRLRSFLHDLEAWRQEARQGSL
SALIWRLLEETGYLDWVGGLPGGSQRQSNLRALYDRARQYETSTSNRGLFRFLTFISRLR
ERGGDLGSSSGGTEPDQAVRIMTIHKSKGLEFPVVFIAGTAKMFNQQDLNAPFLMHKELG
FGPKYVEEQNRVSYPTLPNLAIRRRSQLELLAEEMRVLYVALTRPREKLIMTGTVKDLAA
RAAGWARAKEHTETVLPDYMLAAGRSYLDWVGPALIRHPSAAVLREAAGDQEGYYHRLEY
MPGGDWLFRIIASESLSGSRLNLDSDEEIVNEERQEKTEALKNAEPIDTRRLSSDSASVS
PTDITTRVDSDIAAALSWSYPYERASKTAANTTVTEMKRWLAMQEAGSEDWLNLSSFQVA
ELPEEMEDSQTGGNRLHLRRPKFMGNRRLTPTERGTVYHTLFLHLPLVGVMSAEVIEETK
ARLLNQRLLLDVQAEALDTDKILRFFTGELGRRLLEASHVQRELPFTYTIGAVDFWSRSL
PSMLSAQEIESGPEQQEENMTSVPGHDDRVLMNGIIDCLFEGPEGLVLLDYKTDRVSEYR
TVPHLTEQYRFQLELYAHVIEDITGQRVAEKWLYFLEAGESVRL
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgataagtacatcaagcaccaacggcatacctaagccggaaggtagtatgtggagtgat
gaccagtggcgtgcgatttccgaatccggcaacaacatgctggtagcggcagcggcgggg
tctggtaaaacagcggtgctggtagagcgcattattcgtaaaatcgtcgatccccggctc
ggtttcagcgtggatcggctgctggtagcgacctttacgaaggctgccgccgccgaaatg
cgccaacgtatccgcgaagccttggaacgtgtgctggaacaggagccagatagtgagcat
gtacgtcgccagctatcgctactaaatcgagcctcgataacgacgctccactctttttgt
atggaggtcattcgcaggcattatcaggccattcccctcgatcccggttttcggattatg
aatgagcatgagacggaattgctgcgtcaggagctgctggaagaactgtttgaggaaaag
tatgaggctaacgatgaaggtagcacgtttcgcagactggtggactggtttagcggtgag
cgtacagatgatgcgatgtatgtgcttgttcagcgcttgtatgatttttcgcaaagtcat
ccctggccggagcattggctgagggagacggcagcagcgttccgtgtagaagatgtggcg
gctttgggagaaactccttgggtccgcagcattttggcggatgcggcactttcgctgcgc
ggagcagcaagcctgctggagcaggcgtatgagacggctatgcagcccggcggccctgcg
ccctatgcagtgacgctgcaagaggatgcggcgatggtgaagggactattgcaggagctg
gagacacagccgtgggcatcgctgtatgatcactttcagatcgcggcctttggcaagctc
aagccggtcaaaaaggatcagaccgagcctgcattgcaggagcgggtcaaggcgctccgt
gaggcagccaaaaaaatgatcacggatatgaaggcttccctgttcggcaggagggcagaa
gcctatttggaggaactgcatggggcggctcctctgatggacgcactggtggagaccgtt
attttattcggcgaacgatttcaacagcacaagcagtccaaagggatggtggatttcggg
gatttggagcactattgtctaaaaatattacgtcatcccgactccactccgcacagactg
ctgccttcggacgctgcgctcgaatacaaggagcaattcgacgaggtgctattggatgag
tatcaggatacgaatacggtacaggaggatatcgtcagactggtatcccgtgaagagccg
ggtaaccgttttatggtaggggacgtgaagcagagtatttatcggtttcggctggcggag
ccggatctgtttttgaacaaataccagcgatacggtatgcaggaacaggaagagggcttt
ttaattgatctggcgcgtaatttccgcagtcgggtggaagttgtcgatgcggtcaatttg
gtgtttcggcaaatcatgagcgtggatgtggcggaaattgaatacgatgaacgggcatgg
ctggcgcatggtgcttcctatcctgagcagacgcaaaaggatgccacatccccatatgca
cctgaactgctgttagttgataaaggcgggcgcggtctttcggaggctccggagctgtcc
gaaacgggtgatgagtccgctttacaggaaggcgaaatggctgagcttgctgagctggaa
acggcacaattggaagctcgcgcaatcgcgcaacggattaaggagctgacgggagataca
ggccaaccgttgttgatttatgacaaagggttaaaagcgatgcgtccagcagtcttcggt
gatattgtcattttgctccgttcggcaagcgtatgggcaccgctgattgtagaggaactg
cgtcttgagggcattccggcatccggggagcagacgacaggctttttcaaagcaacggaa
gttgaggtcatgctgtctctgctacacattattgataatccgcagcaggacatcccgctg
gcatctgtgcttcgttcaccgattgtaggcttaaccgaggatgagttggcacaaatcagg
ctgcaaaagccagacggattattttatagcgctctgcttgcggcggctgaggctgaccct
acacaggatagtgaaaatggaacgtccagcgacatgctggaattggatcttttcgctgga
gattcgacagatgcctcagatatggatgacaggaatagcggaaatacgttgcctgaccga
ctgcgttcgtttttgcacgatttggaagcgtggcggcaggaagccagacaaggcagcttg
agtgcattgatttggcgtttgctggaggaaacgggatatctggattgggtaggtggattg
cctggcggctctcaacgtcaaagtaatttgcgggcgctgtatgaccgggcgagacagtat
gagacttctacctctaaccggggcctgttccggtttttgacctttatttcccgtttgcga
gagcgaggcggtgatttgggttcatccagtggcggtactgaacccgatcaggctgtgcgc
attatgacgattcacaagagtaaaggactagaatttcctgttgtgttcatcgccggaacg
gctaaaatgttcaatcagcaggatctgaatgcgccgtttctgatgcataaggagctgggg
tttggtcccaaatatgtggaggaacaaaatcgggtcagctacccgacgctgcctaatttg
gcgatccgtcgacgctcccagctggagctgctggctgaagaaatgcgggtgctgtacgtg
gcgcttacgcgtccacgtgaaaaacttattatgacaggaacggtgaaggatctcgctgca
cgcgcagcgggttgggcacgtgccaaagagcatacggagacagttttacccgattatatg
ctggcggcaggccgcagttatctggactgggtaggtcctgcgttgatccgacatccttct
gctgctgtacttagagaagcggcaggggatcaggaggggtactatcacaggctggaatat
atgccaggcggggattggctattcagaatcatagcttcggagagtctttccggctctcgt
ttgaatttggactctgacgaggagatcgttaatgaagagcgtcaggagaagacggaagca
ttgaaaaatgccgagccgatcgatacaaggaggctctcatccgactccgcatcggttagt
ccaacggatattacaacaagggttgattcagatattgccgctgcgctttcctggtcctat
ccgtatgaacgggcaagcaagacggcggcgaatacaacggtcaccgaaatgaaaagatgg
ctggcgatgcaggaagctggatcggaggattggctgaatctgtcttctttccaggtagcg
gagttaccagaggagatggaagattctcagactgggggaaatcgactacacttgcgcaga
cccaaatttatgggcaatcggcgattgacgccgacggaacgtggaacggtgtaccatacg
ctgtttctccatttgccactggttggtgtgatgagcgccgaggtgattgaggaaacgaag
gctcgtctgttgaaccagcgcttattgctggatgttcaggcggaggccttagataccgat
aaaatattgcgcttcttcaccggcgagctgggtcgcagattgctggaggcatcccacgtt
cagcgtgagcttccgttcacctatacgataggagccgttgatttttggagccgcagcttg
ccgtcgatgttgtctgcgcaggaaatagagtcaggacccgagcaacaggaggaaaacatg
acgtcagtgcctggtcacgatgacagagtgctgatgaatgggattattgactgcctgttt
gaagggccggaagggctggttttgcttgattacaaaacagaccgggtttccgaatatagg
acggtgcctcatttaacggagcaatatcgttttcaactggagctgtacgcccatgtgatc
gaagatattacaggtcaaagggttgctgaaaagtggttgtattttctggaggctggggaa
agtgtgcgattgtag
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