Paucibacter sediminis: PFX98_00890
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Entry
PFX98_00890 CDS
T10150
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pais Paucibacter sediminis
Pathway
pais00040
Pentose and glucuronate interconversions
pais01100
Metabolic pathways
pais01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PFX98_00890
Enzymes [BR:
pais01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
PFX98_00890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Rv3753c
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
WIT12192
UniProt:
A0AA95NBW2
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All DBs
Position
complement(191202..192353)
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AA seq
383 aa
AA seq
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MKHHSRQLSFETREDPDTGARITRLTPADVTCHRNYFYQKCFSNDGERLIFGAEFGPGSA
WNYHLLDLRTQVATQLTDQAGENTFGGFLSPDDRYLYFVRAERQLIRLALSDLSEELVYT
VPQGWVGYGTWVSNSACTRMVGIEIHADDWFPLSDWQKFHQMFHAKPRCRLIRIDLATGA
REIILEKQGWLGHPQYRPFDDHTVAYCHEGPHDLVDARMWFINEDGTNMRCGKQHLEGEA
CTHEFWVPDGSAMIYVSYLKGQSERWICSLDPVTLESKRLALMPPCSHLMSNFDGTLLIG
DGCDSPADVADTGSHQIQTDPYLHLFDLKAGTERKVARHDSSWRVYKGNRQVTHPHPSFT
PDQQQVLYSSDCDGEPALFLADL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaccacagccgacaactcagctttgagacccgcgaggatcccgacaccggcgca
cgcatcacgcgcctgacgccggcggacgtcacctgccatcgcaactacttctaccagaag
tgcttcagcaacgatggcgagcgcctgatcttcggtgccgaattcggaccgggcagcgcc
tggaactaccacctgctggatctgcgcacccaggtggccacccagctcaccgaccaggcc
ggcgagaacacctttggcggctttctcagccccgacgaccggtatctctatttcgtgcgc
gccgagcggcagctgatacgcctggccttgagtgatctgagcgaagagctggtctacacc
gtgccgcagggctgggtgggctatggcacctgggtgtccaacagcgcctgcacccggatg
gtgggcatcgagatccatgcggacgattggttcccgctctccgactggcagaagttccac
cagatgttccacgccaagccgcgctgccgcctgatccgcatcgacctggcgaccggcgcg
cgcgagatcatcctggaaaagcagggctggctgggccatccgcagtaccgcccctttgac
gatcacaccgtggcctattgccacgaaggcccgcatgacttggtggatgcgcgcatgtgg
ttcatcaacgaggacggcacgaacatgcgctgcggcaagcagcatctcgagggtgaggcc
tgcacgcatgagttctgggtgcccgacggctcggccatgatctatgtctcctacctcaag
ggccagagcgagcgctggatctgttcgctggacccggtcacgctggagagcaagcgcctg
gccctgatgccgccctgctcgcacctgatgagcaatttcgacggcacgctgctgatcggt
gatggctgcgactcgcctgccgatgtggccgacaccggcagccaccagatccagaccgac
ccctacctgcatctcttcgatctcaaggcgggcacggagcgcaaggtcgcgcggcacgac
agcagctggcgcgtctacaagggcaaccgccaggtcacgcacccgcatccctcgttcacg
cccgaccagcagcaggtgctctacagctcggactgcgacggcgagccggcgttgttcctg
gccgatctttga
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