KEGG   Paucibacter sediminis: PFX98_01220
Entry
PFX98_01220       CDS       T10150                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pais  Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:pais00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pais02048]
    PFX98_01220
Enzymes [BR:pais01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PFX98_01220
Prokaryotic defense system [BR:pais02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PFX98_01220
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: WIT12252
UniProt: A0AA95NC05
LinkDB
Position
complement(262572..265688)
AA seq 1038 aa
MNLHQEHHFEAEICAHLAANGWLYAEGNAALFDRASGLFMPDLLAWVEATQLDSWQRLNK
THGAALPQVLAERVRKSLNERGTLEVLRRGVELLGLKEPLMLAQFKPALAINPTTQAHYA
ANRLRVVRQVCHSPNNPKAELDLVLFLNGIPVATAELKSDFTQSVHDAVDQYRFDRHPQP
KGGVQEPLLGFPGGALVHFSVSQSEVMMTTRLAGPATNFLPFNRGNAGGAGNAPNPAGFA
TAYLWEEVWARESWLDILHRYLIGKRDDKKQLKSVIFPRYHQLDATRRLVADVLANGAGQ
RYLIQHSAGSGKTNSIAWAAHFLADLHDAEHQKMFDSVLVVSDRNVLDAQLQEAIFDFER
TTGVVASITNESGSKSAQLSQALKDGKKVIVCTIQTFPFALQAVQELAATEGKRFAVIAD
EAHSSQTGEAAAKLKQLLSAQEWAELQDGGEVDTEALLAAQMAARSGGEAKGLTYVAFTA
TPKQKTLELFGRPGADGLPQPFHVYSMRQAIEEGFILDVLKNYTSYKLAFKLAHNGQEYD
ESQVERSAAMKGIMQWVRLHPYNIASKVQIVVEHYRENVQPLLAGRAKAMVVVGSRKEAV
RWQKAIRAYIQKQNYPLGVMVAFSGEVNDPESYPQAVTETSKDLNPGLKGRDIREAFAEP
DYHLLLVANKFQTGFDQPLLCGMYVDKMLGGIQAVQTLSRLNRAHPGKDTTYILDFVNDG
DDILKAFKTYYETAELEATTDPHLVYDLRAKLDASGHYDDYEVERVAKVDTDPNGTQKAL
DAAIAPVADRLLKRYKAAQQAKAAADGEQDGKASQAAKDTLDALVLFKNDMGAYVRLYAF
LSQIFDYGNTDIEKRFLFYKRLIPLLDFGRERDTVDLSKVVLTHHTLKNAGKQPLNLNAD
GSYKLPPMDAVGSGSVQEKQQAYLVEIIQKVNGLFEGELSDDDQLVYVNGVLRGKLLEND
TLMQQAASNTKEQFANSPDLGKALMDAIIDAFEAHQTMSSQALGSERVRDGLKDILLGPA
QLYEALRARSDLGGVARL
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgaacctgcaccaggaacaccacttcgaagccgaaatctgtgcccacctggccgcgaac
ggttggctttatgccgagggcaacgcggcgctgtttgaccgggccagcggcctgttcatg
cccgacctgctggcctgggtggaagccactcagcttgatagctggcagcgtctgaacaag
acccatggcgcggcgctgcctcaggtgctggccgagcgcgtgcgcaagagcctcaacgag
cgcggcacgctggaggtgctgcggcgcggcgtcgagctgctcggtctcaaggagccgctg
atgctggcgcagttcaagccagcgttggccatcaaccccaccacccaggcccactacgcg
gccaaccggttgcgcgtggtgaggcaggtctgccattcgccgaacaatcccaaggcggag
ctggacctggtgctgttcctgaatggcatcccggtggccaccgccgagctgaagagcgat
ttcacgcagagcgtgcacgacgcggtggaccagtaccgcttcgaccgccatccgcaaccc
aaggggggcgtgcaggaaccgctgctgggcttccccggtggggccctggtgcacttctct
gtcagccagagcgaagtgatgatgacgacccgcctggccgggccggcgacgaacttcctg
cctttcaaccgtggcaacgccggcggggccggcaacgcgccgaacccggccggcttcgcg
acggcctatctgtgggaagaggtctgggcccgtgaaagctggctggacatcctgcatcgc
tatctcatcggcaagcgcgacgacaagaagcagttgaagagcgtcatcttcccgcgctat
caccagctcgatgccacgcgcagactggtggccgatgtgctggccaacggcgcgggccaa
cgctatttgattcagcactcggccggctcgggcaagaccaactcgattgcctgggccgcg
cacttcctggccgacctgcacgatgccgagcaccaaaagatgttcgacagcgtgctggtg
gtgagcgaccgcaatgtgctggacgcgcagctgcaggaagccatcttcgatttcgagcgc
accaccggcgtggtggccagcatcaccaacgagtcgggcagcaagagcgcccagctctcg
caggcgctgaaggacggcaagaaggtcattgtctgcaccatccagacctttcccttcgcc
ctgcaggctgtgcaggagctggcggccaccgagggcaagcgcttcgccgtcattgccgac
gaggcccacagctcgcagaccggcgaggcagccgccaagctcaagcagctcttgtctgcg
caggaatgggcggaactgcaggatggtggcgaggtggacaccgaggcgctgctggccgcg
cagatggcggcgcgcagcggcggcgaggccaagggcctgacctatgtggccttcaccgcc
acgcccaagcagaagacgctggagctgttcggccggcctggcgccgatggcctgccgcag
cccttccacgtctactcgatgcgtcaggccatcgaagagggattcatcctcgacgtgctt
aagaactacaccagctacaagctggcgttcaagctggcccacaacggccaagagtacgac
gagagccaggtcgagcgcagtgcggcgatgaagggcatcatgcagtgggtccgactgcac
ccgtacaacatcgccagcaaggtgcaaatcgtcgtcgagcattaccgcgagaacgtgcag
ccgctgctggcggggcgggccaaggccatggtcgtggtgggcagccgcaaggaggcggtg
cgctggcagaaggccattcgcgcctacatccagaagcagaactacccgctgggcgtgatg
gtggccttttcgggcgaggtgaacgacccggagagctatccgcaagccgtgacggagacc
agcaaggatttgaacccagggctcaagggccgcgacatccgcgaggctttcgccgaaccc
gactatcacctgctgctggtggccaacaagttccagactggctttgaccagcccctgctg
tgcggcatgtacgtggacaagatgctgggcggcattcaggcggtgcagacgctgtcacgg
ctgaaccgcgcgcatccgggtaaggacacgacctacatcctcgatttcgtcaacgacggc
gacgacatcctgaaggccttcaagacctactacgagacggccgagctggaagccacgacc
gacccgcacctggtctatgacctgcgcgccaagctcgatgccagcgggcactacgacgac
tacgaggtcgagcgcgtggccaaggtggacacggaccccaacggtacgcagaaggccctg
gacgccgcgattgcgccggtggctgaccggctgctcaagcgctacaaggcggcccagcag
gcgaaggcagcggccgatggcgagcaggacggcaaggcgagccaggcggccaaggacacg
ctcgatgccctggtgctgttcaagaacgacatgggcgcctacgtgcggctctatgccttc
ctctcgcaaatcttcgactacggcaataccgacatcgagaagcgcttcctgttctacaag
cggctcatcccgctgctggactttggccgcgagcgcgataccgtggacctgagtaaggtc
gtgctgacccatcacactctgaagaatgccggcaagcagccgctgaacctgaatgccgac
ggcagctacaagctgccaccgatggacgcggtgggcagtggctcggtgcaggagaagcag
caggcctatctggtggaaatcatccagaaggtaaacgggctcttcgaaggcgagctgagc
gacgatgaccagctcgtctatgtcaacggcgtgctccgcggcaagctgctggagaacgac
acgctgatgcagcaggcggccagcaacaccaaagagcagttcgccaactcgcccgacctc
ggcaaggccttgatggacgccatcatcgacgcgttcgaggcccaccagacgatgagctcg
caggctttgggctcggaacgcgtgcgcgatggcctcaaggacatcctgctggggccggcg
cagctgtacgaagcattgcgcgcgcgctcggatttgggcggggtggctcggctgtag

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