Paucibacter sediminis: PFX98_03215
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Entry
PFX98_03215 CDS
T10150
Name
(GenBank) TetR family transcriptional regulator
KO
K03577
TetR/AcrR family transcriptional regulator, acrAB operon repressor
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pais03000
]
PFX98_03215
Transcription factors [BR:
pais03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PFX98_03215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_2
TetR_C_6
TetR_C_13
TetR_C_11
DUF6299
TetR_C_4
Motif
Other DBs
NCBI-ProteinID:
WIT12633
UniProt:
A0AA95NHQ1
LinkDB
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Position
695469..696152
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AA seq
227 aa
AA seq
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METRHRLLDAAEQLFHQHGVSHTSLQDIAQAAGLTRGAIYWHFEDKAELFDAMMERAAMP
LEEGMSMTSEASPQLSLAELRWGLVNVFYSAMHNERTRRVFEIAMQKVEYTGELQALKDR
KLSAHRDWRAQNQAAFDHAVALGQLPKAMDTRLAAIALVALVDGLIHQWIMDPESFDLMQ
VGQASVEGFLTSLAQSGSALLPPMSAEERARLGQAGICRRAAQSHAE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggagacacgccaccgcctgctcgacgcggcggagcagctcttccatcagcacggggtt
tcacacacctcgctgcaggatatcgcgcaggccgccggcctgacgcgcggcgccatctat
tggcacttcgaggacaaggccgagctcttcgacgccatgatggaacgcgccgccatgccg
ctggaagaaggcatgagcatgacgagcgaggcctcgccgcagctgagcctggccgagctg
cgctggggcctggtgaacgtcttctactcggccatgcacaacgagcgcacccggcgcgtg
ttcgagatcgcgatgcagaaggtggagtacaccggcgagctgcaggccctgaaggaccgc
aagctcagcgcccatcgcgattggcgcgcgcaaaaccaggccgcgttcgaccatgcggtg
gccctgggccagctgcccaaggcgatggacacccgcctcgccgcgatcgccctggtggcc
ctggtggacgggctgatccatcaatggatcatggaccccgagtccttcgacctgatgcag
gtgggccaggccagcgtggagggctttctcaccagcctggcgcaaagcggcagcgccctg
ctgccgcccatgagcgccgaggaacgggcccgcctgggccaggccggcatttgccggcgc
gcggcacaaagccacgccgaatga
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