Paucibacter sediminis: PFX98_04100
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Entry
PFX98_04100 CDS
T10150
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pais Paucibacter sediminis
Pathway
pais00061
Fatty acid biosynthesis
pais00071
Fatty acid degradation
pais01100
Metabolic pathways
pais01212
Fatty acid metabolism
pais02024
Quorum sensing
pais04146
Peroxisome
Module
pais_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFX98_04100
00071 Fatty acid degradation
PFX98_04100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFX98_04100
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFX98_04100
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pais01004
]
PFX98_04100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pais04147
]
PFX98_04100
Enzymes [BR:
pais01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFX98_04100
Lipid biosynthesis proteins [BR:
pais01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFX98_04100
Exosome [BR:
pais04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFX98_04100
Exosomal proteins of breast cancer cells
PFX98_04100
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CARME
Motif
Other DBs
NCBI-ProteinID:
WIT12806
UniProt:
A0AA95NMU9
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All DBs
Position
893969..895663
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AA seq
564 aa
AA seq
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MAAVLADKPWLKSYPEGVPAEIRTDTYRSLVQLLEEAFRKHAKRDAAACMEQRLSFGEVD
EMSQALAAWLQGKGLARGARVAIMMPNVLQYMVAIAAILRAGYVVVNVNPLYTPRELEHQ
LKDSGAEAIIVLENFAATLEEAIAHTDIKHVVLASLGDLLGWWRGPLINFAVRHVRKMVP
EFRLPTGAGHSVTRFNKALDEGRGMRMKPVEVGADDVAFLQYTGGTTGISKGATLLHRNV
VANILQSEAWFGPMLARIGNKQLTTVCALPLYHIFALTACYMLGARLGMMNLLIPNPRDI
PGFIATLQQYRVNMFPAVNTLFNALANEPSFARLDFSELVISNGGGMAVQQATAEKWLSI
TGCPVVEGYGLSETAPVATINRLDLHDFNGSIGLPVPSTEIAIRDDAGQDVPQGERGEIC
IRGPQVMAGYWNRPDETANVMYADGFFKSGDIGVMDAAGFIRIVDRKKDMILVSGFNVYP
TEIEQVVNMHPGVLECAAVGIPDARSGETVKLYVVKSDPALAEEDLSAFCHDQLTAYKRP
KYIEFRDELPKSNVGKILRRELRS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtactcgcagacaagccctggttgaagagctaccccgagggcgttccggcg
gagatccgcaccgacacctaccgttcactggtgcagttgctggaagaagccttccgcaag
catgccaagcgcgacgcggccgcctgcatggagcagcgcctgagctttggcgaggtggac
gagatgtcgcaggcgctggccgcctggctgcagggcaaggggctggcgcgcggcgcgcgc
gtcgccatcatgatgcccaatgtgctgcagtacatggtcgccatcgccgccatcctgcgc
gccggctatgtggtggtgaacgtcaatccgctctacacgccgcgcgagctggagcaccaa
ctgaaggactcgggtgccgaagccatcatcgtgctggagaactttgccgccacgctggaa
gaggcgattgcccacaccgatatcaagcatgtggtgctggcctcgctgggcgacctgctg
ggctggtggcgcggcccgctgatcaatttcgcggtgcgccatgtgcgcaagatggtgccg
gagttccgcttgcccaccggtgccggccacagcgtcacgcgcttcaacaaggcgctcgac
gagggccgcggcatgcgcatgaagccggtggaggtgggcgccgacgacgtggcctttctg
cagtacaccggcggcaccaccgggatctccaagggcgccacgctgctgcatcgcaatgtg
gtggccaacatcctgcaaagcgaggcctggttcgggcccatgctggcccgcatcggcaat
aagcagctcacgaccgtctgcgccctgcccctgtatcacatcttcgcgctcacggcctgc
tacatgctgggcgcgcggctgggcatgatgaacctgctgatcccgaatccgcgcgacatc
cccggcttcatcgcgacgctgcagcagtatcgcgtcaatatgttccctgcggtcaacacg
ctcttcaacgccctggccaacgagccctcgttcgcgcgcctggatttcagcgagctggtg
atctccaacggcggcggcatggcggtgcaacaggccacggcggagaagtggctcagcatc
acgggctgccccgtggtggagggctacggcctgtcggaaaccgcccccgtcgccaccatc
aaccggctcgacctgcacgacttcaatggctcgatcggcctgcccgtgcccagcaccgag
atcgcgatccgcgacgacgccgggcaggacgtgccgcagggcgagcgcggcgaaatctgc
atccgcggcccacaggtgatggcgggctactggaaccgcccggacgagaccgccaacgtc
atgtatgcggacggcttcttcaagagcggcgacatcggcgtgatggacgccgcgggcttc
atccgcatcgtcgaccgcaagaaggacatgattctggtctccggcttcaacgtctatccc
accgagatcgagcaggtcgtcaacatgcatccgggcgtgctggaatgcgccgccgtgggc
atcccggacgcccgctcgggcgagaccgtcaagctctatgtcgtgaagagcgaccccgcc
ctggcggaggaagacctcagcgccttctgccatgaccagctcaccgcctacaagcgcccc
aaatacatcgagttccgcgacgagctacccaagagcaacgtcggcaagatactgcggcgc
gaattgcgcagctga
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