Paucibacter sediminis: PFX98_05060
Help
Entry
PFX98_05060 CDS
T10150
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pais Paucibacter sediminis
Pathway
pais03030
DNA replication
pais03430
Mismatch repair
pais03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFX98_05060 (holA)
03430 Mismatch repair
PFX98_05060 (holA)
03440 Homologous recombination
PFX98_05060 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pais03032
]
PFX98_05060 (holA)
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_05060 (holA)
Enzymes [BR:
pais01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFX98_05060 (holA)
DNA replication proteins [BR:
pais03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFX98_05060 (holA)
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFX98_05060 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
RTC
Motif
Other DBs
NCBI-ProteinID:
WIT12978
UniProt:
A0AA95NIC1
LinkDB
All DBs
Position
1106185..1107258
Genome browser
AA seq
357 aa
AA seq
DB search
MQIRAEALAAQLAKGLKPIYTVHGDEPLLAQEAADTIRAAARAQGYGERKVFIVAGAYFD
WGPVLGAAQAMSLFAERQFIEIRIPSGKPGKDGSEALQRYCERLPEDVVTLVTLPRLDKT
QLSSAWFSALDGAGVTLKVEPVERRALPQWIAQRLAAQGQRVSEGEEGQRALAFFADRVE
GNLLAAHQELQKLALLYPQGEIALAQIESAVLNVARYDVFKLSEAVLAGQVPRVLRMLEG
LEAEGEAAVLVHWTLAEDVRALKKVRDALDAGKPLPMALREARVWGNKERLFERIAPGLN
DQNLASLVAAAQICDGIVKGLRHPEWPLDAWGALRRLALMLVEATQARGGIKLALQA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgcgccgaggccctcgccgcccaactcgccaaggggctcaagcccatctac
accgtgcatggcgacgagcccctgctggcgcaggaggcggccgacaccatccgcgccgcc
gcgcgcgcgcagggctatggcgagcgcaaggtcttcatcgtcgcgggcgcgtacttcgac
tggggcccggtgctgggcgcggcccaggccatgagcctgttcgccgagcgccagttcatc
gagatccgcatcccctcgggcaagcccggcaaggacggctcggaggccttgcagcgctat
tgcgaacgcctgcccgaggacgtggtcacgctcgtgaccctgccgcgcctagacaagact
cagctcagcagtgcctggttcagcgcgctggacggcgccggcgtcaccctcaaggtggag
ccggtggaacgccgcgccctgccgcagtggatcgcccagcgtctggccgctcagggccaa
cgcgtcagcgagggcgaggaaggccagcgcgccctggccttttttgccgaccgcgtggag
ggcaatctgctcgccgcccaccaggagctgcagaagctcgccctgctctatccgcagggc
gagatcgcgctggcgcagatcgagtcggcggtgctgaacgtggcgcgctacgacgtcttc
aagctcagcgaggcggtgctggccggccaggtgccgcgcgtgctgcgcatgctggagggc
ctggaggccgagggcgaggccgcggtgctggtgcactggaccctggccgaggacgtgcgc
gcgctcaagaaggtgcgcgatgcgctggacgccggcaagcccctgccgatggcactgcgc
gaagcgcgcgtatggggcaacaaggagcggcttttcgagcgcatcgcgccagggctaaac
gatcaaaatctggccagcctggtggcggcggcacagatctgcgacggcatcgtcaagggc
ctgcgccaccccgaatggccgctggacgcctggggtgcgctgcgccgcctggccctgatg
ctggtcgaggcgacccaggcgcgcggcggcatcaagctggctctgcaggcctga
DBGET
integrated database retrieval system
