KEGG   Paucibacter sediminis: PFX98_05060
Entry
PFX98_05060       CDS       T10150                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pais  Paucibacter sediminis
Pathway
pais03030  DNA replication
pais03430  Mismatch repair
pais03440  Homologous recombination
Brite
Enzymes [BR:pais01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFX98_05060 (holA)
DNA replication proteins [BR:pais03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PFX98_05060 (holA)
DNA repair and recombination proteins [BR:pais03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PFX98_05060 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_delt_C RTC
Other DBs
NCBI-ProteinID: WIT12978
UniProt: A0AA95NIC1
LinkDB
Position
1106185..1107258
AA seq 357 aa
MQIRAEALAAQLAKGLKPIYTVHGDEPLLAQEAADTIRAAARAQGYGERKVFIVAGAYFD
WGPVLGAAQAMSLFAERQFIEIRIPSGKPGKDGSEALQRYCERLPEDVVTLVTLPRLDKT
QLSSAWFSALDGAGVTLKVEPVERRALPQWIAQRLAAQGQRVSEGEEGQRALAFFADRVE
GNLLAAHQELQKLALLYPQGEIALAQIESAVLNVARYDVFKLSEAVLAGQVPRVLRMLEG
LEAEGEAAVLVHWTLAEDVRALKKVRDALDAGKPLPMALREARVWGNKERLFERIAPGLN
DQNLASLVAAAQICDGIVKGLRHPEWPLDAWGALRRLALMLVEATQARGGIKLALQA
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcagatccgcgccgaggccctcgccgcccaactcgccaaggggctcaagcccatctac
accgtgcatggcgacgagcccctgctggcgcaggaggcggccgacaccatccgcgccgcc
gcgcgcgcgcagggctatggcgagcgcaaggtcttcatcgtcgcgggcgcgtacttcgac
tggggcccggtgctgggcgcggcccaggccatgagcctgttcgccgagcgccagttcatc
gagatccgcatcccctcgggcaagcccggcaaggacggctcggaggccttgcagcgctat
tgcgaacgcctgcccgaggacgtggtcacgctcgtgaccctgccgcgcctagacaagact
cagctcagcagtgcctggttcagcgcgctggacggcgccggcgtcaccctcaaggtggag
ccggtggaacgccgcgccctgccgcagtggatcgcccagcgtctggccgctcagggccaa
cgcgtcagcgagggcgaggaaggccagcgcgccctggccttttttgccgaccgcgtggag
ggcaatctgctcgccgcccaccaggagctgcagaagctcgccctgctctatccgcagggc
gagatcgcgctggcgcagatcgagtcggcggtgctgaacgtggcgcgctacgacgtcttc
aagctcagcgaggcggtgctggccggccaggtgccgcgcgtgctgcgcatgctggagggc
ctggaggccgagggcgaggccgcggtgctggtgcactggaccctggccgaggacgtgcgc
gcgctcaagaaggtgcgcgatgcgctggacgccggcaagcccctgccgatggcactgcgc
gaagcgcgcgtatggggcaacaaggagcggcttttcgagcgcatcgcgccagggctaaac
gatcaaaatctggccagcctggtggcggcggcacagatctgcgacggcatcgtcaagggc
ctgcgccaccccgaatggccgctggacgcctggggtgcgctgcgccgcctggccctgatg
ctggtcgaggcgacccaggcgcgcggcggcatcaagctggctctgcaggcctga

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