Paucibacter sediminis: PFX98_05745
Help
Entry
PFX98_05745 CDS
T10150
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pais Paucibacter sediminis
Pathway
pais03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFX98_05745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pais03019
]
PFX98_05745 (recQ)
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_05745 (recQ)
Enzymes [BR:
pais01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFX98_05745 (recQ)
Messenger RNA biogenesis [BR:
pais03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PFX98_05745 (recQ)
DNA repair and recombination proteins [BR:
pais03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PFX98_05745 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WIT13109
UniProt:
A0AA95NIK7
LinkDB
All DBs
Position
1263947..1265824
Genome browser
AA seq
625 aa
AA seq
DB search
MSQHADHHHAPSDILQEVFGYAAFRGAQGEIVEHVTHGGDALVLMPTGGGKSLCYQIPAI
ARHRARQGVSIVVSPLIALMHDQVGALEEAGVHAAFLNSTLSSEEAAHVEREMMSGRLVM
LYAAPERITNPRFLAQLDSLRERGLLSLFAIDEAHCVSQWGHDFRSEYLALSLLHERFPE
VPRIALTATADDITRADIIERLKLEDARIFISSFDRPNIRYAIVEKDKPRDQLLRFIHDE
HEDEAGVVYCQSRKKVEETAAWLEGEGIKALPYHAGLDAGVRQRHQDRFLREDGIVMVAT
IAFGMGIDKPDVRFVAHLDLPKNIESYYQETGRAGRDGAPADAWMAYGLADVVNQRRMID
ESPASEDFKKVQRGKLDALLALAEATDCRRVRLLGYFGEHSKPCGNCDNCLHPPATWDGT
EAARKALSCIYRFHQNGGQRFGVGHLLDVLRGKETDKVKQYGHQHLSTWAIGADLSEQQW
RAVLRQLVALGHVVAEGEYNTLALSETARAVLKGEVQLLLRVPTVAPKKGKLSRTARPTT
QKGGKGEAIDLDDEAQQRFGQLKAWRAEVAKEHGLPAYVIFQNVTLAEMAKQHPRSLDEL
AHISGVGAKKLEAYGSEILRVLGTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcacgccgaccatcatcacgccccctccgacatcctgcaagaggtgtttggc
tatgccgccttccggggcgcccagggtgagatcgtcgagcatgtcacccatggcggggac
gcgctggtgctgatgcccaccggcggcggcaagagcctgtgctaccagatcccggccatc
gcccgccaccgcgcgcgccagggcgtgagcatcgtggtgagcccgctgatcgcgctgatg
cacgaccaggtgggtgcgctggaagaggccggcgtgcatgccgccttcctcaactccacg
ctcagcagcgaggaggccgcgcatgtggagcgcgagatgatgagcggccgcctggtgatg
ctctacgccgcgcccgagcgcatcaccaacccgcgcttcctggcccagctggattcgctg
cgcgagcgcggcctgctgagcctgttcgcgatcgacgaggcgcattgcgtcagccaatgg
gggcatgacttccgcagcgagtacctggcgctgtcgctgctgcacgagcgcttccccgag
gtgccgcgcatcgcgctcaccgccaccgccgacgacatcacgcgcgccgacatcatcgag
cgcctcaagctcgaagacgcgcgcatcttcatctccagcttcgaccggccgaatatccgc
tacgccatcgtcgagaaggacaagccgcgcgatcagctgctgcgcttcatccacgacgag
catgaggatgaggccggcgtcgtctactgccagagccgcaagaaggtggaggaaaccgcc
gcctggctggagggcgagggcatcaaggccctgccctatcacgccgggctcgatgccggc
gtgcgccagcgccaccaggaccgctttctgcgcgaggacggcatcgtgatggtggccacc
atcgccttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccacctggacctg
cccaagaacatcgagagctattaccaggagaccggccgcgccggccgcgacggcgcgccg
gccgatgcctggatggcctatggcctggccgatgtggtgaaccagcgccgcatgatcgac
gaaagccccgccagcgaggacttcaagaaggtgcagcgcggcaagctcgatgccctgctg
gccctggccgaggccaccgactgccggcgcgtgcgcctgctgggctatttcggcgagcac
agcaagccctgcggcaactgcgacaactgcctgcacccgcccgccacctgggacggcacc
gaggccgcgcgcaaggcgctctcctgcatctaccgcttccaccagaacggcggccagcgc
tttggcgtgggccatctgctggacgtgctgcgcggcaaggagaccgacaaggtcaagcaa
tacggccaccagcacctgagcacctgggccatcggcgccgacctgtccgagcagcaatgg
cgcgcggtgctgcgccagctggtggcgctgggccatgtggtggccgagggcgagtacaac
accctggccttgagcgaaacggcgcgcgccgtgctgaagggcgaggtgcagctgctgttg
cgcgtgcccacggtggcgcccaagaagggcaagctctcgcgcacggcccggcccaccacc
caaaagggcggcaaaggcgaggcgattgacctggacgacgaggcccagcagcgcttcggc
caactcaaggcctggcgtgccgaggtcgcgaaggaacacggcctaccggcctatgtgatc
ttccagaacgtcaccctggccgagatggccaagcagcatccgcgcagcctggacgagctg
gcccatatcagcggcgtgggcgccaagaagctggaggcctatggcagcgagatcctgcgc
gtgctaggcacggactga
DBGET
integrated database retrieval system
