Paucibacter sediminis: PFX98_05950
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Entry
PFX98_05950 CDS
T10150
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pais Paucibacter sediminis
Pathway
pais00550
Peptidoglycan biosynthesis
pais01100
Metabolic pathways
pais01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFX98_05950 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFX98_05950 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pais01011
]
PFX98_05950 (mrdA)
Enzymes [BR:
pais01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFX98_05950 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pais01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PFX98_05950 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WIT13150
UniProt:
A0AA95NF59
LinkDB
All DBs
Position
complement(1311104..1313098)
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AA seq
664 aa
AA seq
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MTVLKNLHQELSRFRFRVLAAAGFVLFCFALLAARLVFLQVVQHDTLLERAESNRVTVVP
IVPNRGLIKDRNGIVLASNYSAYTLEITPSKVLNLDETIDALAGVVEIQGRDRRRFKRLM
EESKNFESLPIRTKLTDTEVARFAAQRFRFPGVEIKARLFRNYPMGQVGAHLLGYIGRIN
QAEKKAMEDWPEEELSNYRGTEYIGKLGLEQAYEKELHGSTGFEEMETSAGGRAVRRLAH
QPPTPGNTLMLSIDIRLQALVEELYKDRRGALVAIDPRSGEVLAFVSKPTFDPNLFVDGI
DADSWRELNEDIDKPLLNRALRGTYPPGSTFKPFMAMAALNSGKRGPSVIVQDNLTYSFG
GRTFGSPETDRPGPKDMRLAIVSSSNVYFYSLANEMGVDLIHDQLEPFGLGRKTEIDVQG
EVTGVLPSQDWKRRYFAKSPANQKWFPGETISLGIGQGYNNFTMLQMATAVSTLATGGQR
YKPRLVREIEDVVRHEKRRIASDALEPLPLKPEHVEVIVNAMNGVTIEGTSRAAFLGAAY
RSGGKTGTAQAIGLKAGEKYSAIKADEHKRDHSLYIAFAPVEAPTIALAVIVENAGFGST
SAAPIARRVFDYVLTGQYPSEEDIALTQQGKTTAPVGQPRPVAQVPLPGAVPAAASAAAS
GASR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacggttctgaagaacctccatcaggagctctcgcgctttcgcttccgcgtgcttgcg
gcggcgggcttcgtgctgttctgctttgccctgctggcggcgcgcctggtgttcctgcag
gtggtgcagcacgacaccctgctggagcgcgccgagtcgaaccgcgtcacggtggtgccc
atcgtgcccaaccgcggcctcatcaaggaccgcaacggcatcgtgctggccagcaattac
tcggcctacacgctcgagatcacgccctccaaggtgctcaatctggacgagaccatcgac
gcgctggccggcgtggtggagatccaggggcgtgaccgccgccgcttcaagcggctgatg
gaggagagcaagaatttcgagtccctgccgatccgcaccaagctgacggataccgaggtc
gcgcgcttcgccgcccagcgcttccgcttccccggcgtggagatcaaggcgaggctgttc
cgcaactatccgatggggcaggtgggcgcgcatctgctgggctatatcggccgcatcaac
caggccgagaagaaggccatggaggattggcccgaggaggagctctccaactaccgcggc
accgaatacatcggcaagctgggcctggagcaggcctacgagaaggagctgcacggcagc
accggcttcgaggaaatggaaaccagcgccggcggccgcgctgtgcggcgcctggcgcac
cagccgcccacgcccggcaacacgctgatgctgtcgatcgacatccgcctgcaggccctg
gtggaagagctctacaaggaccgccgtggcgccctggtggcgatcgacccgcgcagcggc
gaggtgctggccttcgtctccaagcccaccttcgatcccaacctgttcgtcgacggcatc
gatgccgacagctggcgcgagctcaacgaggacatcgacaagccgctgctgaaccgcgcg
ctgcgcggcacctacccgcccggctcgaccttcaagcccttcatggcgatggcggcgctc
aacagcggcaagcgcgggcccagcgtgatcgtgcaggacaatctgacctacagcttcggc
ggccgcaccttcggcagcccggagaccgaccggcccggccccaaggacatgcgcctggcg
atcgtcagctcgtccaatgtctacttctacagcctggccaacgagatgggggtggacctg
atccacgatcaactggaacctttcggcctgggccgcaagaccgagatcgacgtgcagggc
gaggtcaccggcgtgctgccctcgcaggactggaagcgccgctacttcgccaagagtccg
gcgaatcagaaatggtttcccggtgagacgatctcgctgggcattggccagggctacaac
aacttcaccatgttgcagatggccaccgccgtgtcgaccctggccaccggcggccagcgc
tacaagccgcgcctggtgcgagagatcgaggatgtggtgaggcatgagaagcgccgcatc
gccagcgacgcgctcgagcccctgccgctcaagcccgagcatgtggaggtgatcgtcaac
gccatgaacggcgtgacgatcgagggcacctcgcgcgccgccttcctgggcgcggcctac
cgcagcggcggcaagaccggcacggcccaggccatcggcctgaaggcgggcgagaaatac
agcgccatcaaggccgacgagcacaagcgcgaccactcgctctacatcgcctttgcgccc
gttgaggcgcccaccatcgcgctggcggtgatcgtggagaacgccggcttcggctcgacc
tcggccgcgccgatcgcgcgccgcgtgttcgactatgtgctgaccggccagtaccccagc
gaggaggacatcgcgctgacccagcagggcaagaccaccgcgccggtgggccagccgcgc
ccggtcgcgcaagtgcccctgccaggggcggtgccggcggccgccagcgcagcggcatcg
ggagcctcgcgatga
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