Paucibacter sediminis: PFX98_06110
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Entry
PFX98_06110 CDS
T10150
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pais02000
]
PFX98_06110
Transporters [BR:
pais02000
]
Other transporters
Pores ion channels [TC:
1
]
PFX98_06110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WIT13181
UniProt:
A0AA95NNF8
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All DBs
Position
complement(1345606..1347684)
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AA seq
692 aa
AA seq
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MSKPLLALGLLLCGLAQAQSSEEQDLALAFGDSALVSIATGSAQPLRRAPAVAAVITAAD
IEAMGASDLDQVLERVPGLHVGRGSGTYTPLYVARGIYSQFNPQILMLQNGVPMTTLLVG
NRGNGWGGLPVQHIARIEVMLSPGSALYGSDAYAGVINIVTKGPRDLHGGEAGLRLGSFG
ARDAWLQQGGKLGPAEYAAFVQRGRGKGARNLVEADAQSFNDATFGSHASLAPGALNNGH
DSWDANLDLALEGWRWRINYKLRELGTGAGISQALDPQGLYRTERLVSDLSWQQAALLPD
LSAGFGLSALHYSQQFPRPLQIYPAGVRFPTGVFADGMFGAPETWERQWRLHAYLGYEGL
AHHKLRAGLGYEDLDLYRTRELKNFAFAANGLPIPLPTITDHSDIDPFMRPQRRSVAYAY
LQDDWQLAPDWTLTLGLRHDRYSDFGNTTNPRLALVWEAAYNLSAKLLYGQAFRAPAFNE
QYSISNPVARGNPAIRPETLATREAQLIWQPGRHLQLSLAAFEHRLRDLIRTTPNAQPGT
GTTFNNTGDQSGRGLELSGSWDPGAGLHLQLSLSQQRSRDESSGRSPGYAPRRHAYLLAD
WRVSEAWQLGAQLNRVAGRERPPGDVRPPVADYTNVDLSLRHAPQGARWSVAALLRNATD
SDQREPSLAPGRLVNDLPLAPRSLSVELDFRY
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccactccttgccctgggcctgctgctgtgcgggctggcgcaggcgcagagc
agcgaagagcaagacctggccctggcctttggcgacagcgccctggtgagcatcgccacc
ggcagcgcccagccgctgcggcgcgcgccggcggtggccgcggtgatcaccgccgccgac
atcgaggcgatgggcgccagcgatctggaccaggtgctggagcgcgtgcccggcctgcat
gtcgggcgcggcagcggcacgtacacgccgctttacgtggcgcgcggcatctacagccag
ttcaatccgcagatcctgatgctgcagaacggcgtgccgatgacgaccctgctggtgggc
aaccgcggcaatggctggggcggcctgccggtgcagcacatcgcgcgcatcgaagtcatg
ctcagccccggctcggcgctgtacggctccgacgcctatgccggcgtgatcaacatcgtc
accaaggggccgcgcgatctgcacggcggcgaggccggcctgcgcctgggctccttcggc
gcgcgcgatgcctggctgcagcagggcggcaagctcgggccggccgaatacgccgccttt
gtgcagcgcggccgcggcaagggcgcgcgcaatctcgtcgaggccgatgcccagagcttc
aacgacgccaccttcggctcgcatgccagcctggcgcccggggcgctcaacaacgggcac
gacagctgggatgcgaacctcgatctggcgctggagggctggcgctggcgcatcaactac
aagctgcgcgagctcggcaccggggccggcatctcgcaggcgctggacccgcagggcctc
taccgcaccgagcgcctggtgagcgacctgagctggcagcaggcggcgctgctgccggac
ctgagcgccggcttcgggctcagcgccctgcattacagccagcagtttccgcggccgctg
cagatctacccggcgggcgtgcgctttcccaccggcgtgtttgcggacggcatgttcggc
gcgcccgagacctgggagcgccagtggcgcctgcatgcctacctgggctacgagggcctg
gcccaccacaagctgcgcgccggcctgggctacgaggacctggacctctaccgcacgcgc
gagctgaagaacttcgccttcgccgccaacggcctgccgatcccgctgccgaccatcacc
gaccacagcgacatcgaccccttcatgcggccgcagcgccgcagcgtggcctatgcctat
ctgcaggacgactggcagctggcgcccgactggacgctcaccctgggcctgcggcacgac
cgctactccgacttcggcaacaccaccaacccgcgcctggccctggtctgggaggctgcc
tacaacctcagcgccaagctgctctacggccaggcctttcgcgcgccggccttcaacgag
cagtacagcatcagcaacccggtggcgcgcggcaacccggcgatccggcccgagaccctg
gccacgcgcgaggcccagctgatctggcagcccgggcgccatctgcagctcagcctggcg
gccttcgagcaccggctcagggatctcatccgcaccacccccaatgcgcagcccggcacc
ggcaccaccttcaacaacaccggcgaccagagcgggcgcgggctggagctgagcggcagc
tgggacccgggcgccggcctgcatctgcagctgagcctgagccagcagcgctcgcgcgac
gaaagcagcggccgcagccccggctatgcgccgcgccgccatgcctatctgctggccgac
tggcgcgtcagcgaggcctggcagctgggtgcgcagctcaaccgggtggcgggccgcgag
cgcccgccgggtgatgtgcgcccgccggtggccgactacaccaatgtcgatctgagcctg
cgccacgcgccgcagggcgcgcgctggtcggtggccgcgctgctgcgcaatgccaccgac
agcgaccagcgcgagcccagcctggcgccgggccgtctcgtcaacgacctgcccttggcg
ccgcgcagcctgagcgtggagctggacttccgctactga
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