Paucibacter sediminis: PFX98_06590
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Entry
PFX98_06590 CDS
T10150
Name
(GenBank) DEAD/DEAH box helicase
Organism
pais Paucibacter sediminis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TPR_10
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIT13273
UniProt:
A0AA95NGT7
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Position
complement(1462040..1466209)
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AA seq
1389 aa
AA seq
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MSPYPDPSTAATEPELQAVLDALLLMGGSRGAAGLALWLQAQGEIASAERFSQARVQLAL
RQLQQQGRIQPLSGRVYGVPPGAQAERLQALLLLPAARQYWQRLLYVYSDGQAHARHPMQ
WIGLRSADEAVRMLRLFLHSGVDLATYQAQLRGPLLELSHAEVQTAALTEPWMPAAVAAL
PAELSETLLRQALKTLSADDARRGQIRQWLQQRLATAPQALGPEARAQLAEARLQALDLD
GARALLQGEPGLALVQAAERLAQGAWAEAAALFEQALKVRRQASGQRRGLLERELARLYL
VSLLAQSDPLAWAQARKFCIAESGSRKPSAHEWWGLWAHAIGVRLGEEGLDEQALAYIPG
LEQRAHALDQACDRLLLAAWLGKPAPGWTLAAATALLQRLQAAEQHWQACLLAQALERLE
LGELTHKLSVQPTPLNWLGGPHEAWRDALAAITQLAEEQAAQTGISELAWQLELDAQGRV
QDILPFERSRSARGALKLKPVTLSKLKKQGQSSSARDNAVLRHIERSIYSAANSYELDVS
QAAIALVGHPALMFADAPGQWVELVEALPELEVRQGADASYAFHIHPPLLSSEPPKLSAW
YGSRHEAEVDKRNSLRVLRDGPAHARLLRISPTQRRVAELVNQGWTVPASAQAELGAALQ
VLSGHFQLHSDAAAGRAVAGDSRLRARLSPLGEGLQLQLVAQPFGGFGPAVTPGAGRARL
LCMHEGLSLATERDLAAEVEHRRAVLEAMPFLDPELPPDLPWLLTEPEEALRAVELLPGL
PGIAALDWPKGKPLRVTALASSGVRVQVSSARNWLALQGEAQLDEQRVLGLQELMQLARA
SRSRYVRLAEGEYLALSEQLRQQLRDLDALAVARKDQLQLPPASASWLDETLGEMQLAGD
APWRARMDALAAAAALQPAVPAGLRAELRGYQEEGYAWMARLAAAGLGACLADDMGLGKT
VQTLALLIARAAQGPALVLAPTSVCANWLAEGELFAPGLNLALYGSAGERAAQIAAAGPG
DVLIASYALAQNDAELFAAKDWASLVLDEAQALKNAATKRAKSVAEFKAGFRLALSGTPV
ENRLADLWSIMQLINPGLLGTAAQFAERFANPIERKEQPDAAARQRLRRLVSPFLLRRTK
AQVLQDLPPRTEIVHLVQPGGEERSFLEALRRDAQASVAAAAQGQQGGGPAIQVLAELMR
LRRAACDPRLVAPELGLVGAKLGEFELLVRELVDGAHKALVFSQFTDYLKLLAERLDAMG
VRYQYLDGSTPAAARAQRVAAFQRGEGEVFLISLKAGGFGLNLTMADYVLIVDPWWNPAA
EDQAMGRAHRMGQQHPVTVYRLVTAGSVEERIIELHRDKRGLAEGILAGQEEATVLDAAA
LSALLMDSD
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgtaccccgaccccagcaccgccgccaccgaacccgaactgcaagccgtcctc
gatgccctgctgctgatgggcggcagccgcggtgcggccgggctggcgctgtggttgcag
gcccagggcgagatcgccagcgccgagcgcttcagccaggcgcgcgtgcagctggcgttg
cgccagctgcagcaacagggccgcatccagccgctcagcggccgggtctacggcgtgccg
ccgggcgcgcaggccgagcgcctgcaggcgctgctgctgctgcccgcggcgcgccagtat
tggcagcgcctgctctacgtctacagcgatggccaggcccatgcgcgccatcccatgcag
tggataggcctgcgctcggccgacgaggcggtgcgcatgctgcgcctgttcctgcactcg
ggcgtggacctggccacctaccaggcccagctgcgcggcccgctgctcgagctgagccat
gcggaggtccagaccgcggcgctcaccgagccctggatgccggccgcggtggcggccctg
ccggccgagctgagcgagaccctgctgcgccaggcgctcaagaccctgagcgccgacgac
gcgcgccgcggccagatccgccaatggctgcagcagcgcctggccactgcgccgcaagcg
ctgggccccgaggcgcgcgcgcagctcgccgaggcccgcctgcaggcgctggatctggac
ggtgcgcgcgccctgctgcagggcgagccggggctggcgctggtgcaggccgccgagcgc
ctggcgcagggcgcctgggccgaggccgcggccctgttcgagcaggccctgaaggtgcgg
cgccaggccagcggccagcgccgcggcctgctggagcgcgagctggcgcggctctacctg
gtgagcctgctggcgcagagcgacccgctcgcctgggcgcaggcgcgcaagttctgcatc
gccgaatcgggctcgcgcaagccctcggcgcatgaatggtggggcttatgggcccatgcg
atcggcgtgcgcctgggcgaggagggcctggacgagcaggccctggcctacatccccggg
ctggagcagcgtgcccacgcgctcgaccaggcctgcgaccgcctgctgctggccgcctgg
ctgggcaagcccgcgccgggctggacgctggccgccgccacggccctgctgcagcgcctg
caggcggccgagcagcattggcaggcctgcctgctggcgcaggcgctggagcggctggag
ctcggcgagctgacgcacaaattgagcgtccagccaacacccctcaactggctgggcggg
ccgcacgaggcctggcgcgatgcgctcgccgccatcacccagctggccgaggagcaggcg
gcgcagaccggcatcagcgagctggcctggcaactcgagctcgacgcccagggccgcgtg
caggacatcctgcccttcgagcgcagccgcagcgcgcgtggggcactcaagctcaagccg
gtgacgctctccaagctcaagaagcagggccagagcagcagcgcgcgcgacaacgccgtg
ctgcgccatatcgaacgcagcatctacagcgccgccaacagctacgagctcgacgtcagc
caggccgccatcgccctggtcgggcatccggcgctgatgtttgccgatgcccccggccaa
tgggtggagctggtggaggccctgcccgagctggaggtgcgccagggcgcggatgccagc
tacgccttccacatccacccgccgctgctcagcagcgagccgcccaagctgagcgcctgg
tatggcagccggcacgaggcagaggtggacaagcgcaacagcctgcgcgtgctgcgcgac
gggccggcccatgcgcgcctgctgcgcatcagccccacccagcgccgcgtggccgagttg
gtgaaccagggctggaccgtgcccgccagcgcgcaggccgagctgggcgcggccctgcag
gtgctgagcggccatttccagctgcacagcgatgccgccgccggccgcgcggtggcgggc
gacagccgcctgcgcgcgcgcctgagcccgctcggcgagggcctgcagctgcagctggtg
gcccagcccttcggcggcttcggccccgccgtcacgcccggcgcgggccgcgcgcgcctg
ctgtgcatgcacgagggcctgagcctggcgaccgagcgcgacctcgccgccgaggtggaa
catcgccgcgcggtgctggaggccatgcccttcctggaccccgagctgccgcccgacctg
ccctggctgctcaccgagcccgaggaggcgctgcgcgcggtggagctgctgccgggcctg
cccggcatcgccgcgctcgactggcccaagggcaaaccgctgcgcgtcaccgcgctggcc
agcagcggcgtgcgcgtgcaggtcagcagcgcgcgcaactggctggccctgcagggcgag
gcccagctggacgagcagcgcgtgctgggcctgcaggagctgatgcagctggcgcgcgcc
tcgcgcagccgctatgtgcgcctggccgagggcgaatacctggcattgagcgagcagctg
cgccagcagctgcgcgacctcgacgcgctggccgtggccaggaaggaccagctgcagctg
ccccccgccagcgccagctggctggatgaaaccctgggcgagatgcagctggccggcgac
gccccctggcgcgcccgcatggacgcgctggccgccgccgctgcgctgcagcccgctgtg
ccagcgggcctgcgcgccgagctgcggggctatcaagaggagggttatgcctggatggcg
cgcctggcggcggccggcctgggcgcctgcctggccgacgacatgggcctgggcaagacg
gtgcagaccctggcgctgctgatcgcgcgcgccgcccagggcccggccctcgtgctggcg
cccacctcggtatgtgcgaactggctggccgagggcgagctgttcgcgccgggcctgaac
ctggcgctctacggcagtgcgggcgaacgcgccgcccagatcgccgcggccggccccggc
gatgtgctgatcgcctcctacgcgctggcgcagaacgacgccgagctgttcgccgccaag
gactgggccagcctggtgctggacgaggcccaggcgctcaagaacgccgccaccaaacgc
gccaagtcggtggccgagttcaaggccggcttccggctcgcgctctcgggcacgccggtg
gagaaccgcctggccgatctctggtccatcatgcagctcatcaacccgggcctgctgggc
acggccgcgcagttcgccgagcgctttgccaacccgatcgagcgcaaggagcagccggac
gcggccgcgcgccagcgcctgcgccgcctggtctcgcccttcctgctgcgccgtaccaag
gcccaggtgctgcaagacctgcccccgcgcaccgagatcgtccacctggtgcagcccggc
ggcgaggagcgcagctttctcgaagcgctgcgtcgcgatgcccaggccagcgtggccgcg
gccgctcaaggccagcagggcggcggccccgccatccaggtgctggccgagctgatgcgc
ctgcgccgcgccgcctgcgatccgcgcctggtggcgcccgagctgggcctggtgggcgcc
aagctgggcgagttcgagctgttggtgcgcgagctggtggacggcgctcacaaggcgctg
gtgttcagccagttcaccgattacctgaagctgctggccgagcgcctcgacgcgatgggc
gtgcgctaccagtacctcgacggcagcacgcccgcggcggcgcgcgcccagcgcgtggcg
gccttccagcgcggcgagggcgaggtcttcctcatcagcctcaaggccggcggcttcggc
ctcaacctcaccatggccgactatgtgctgatcgtcgacccttggtggaaccccgccgcc
gaagaccaggcgatgggccgcgcccaccgcatgggccagcagcacccggtcaccgtctac
cgcctggtcaccgccggctcggtggaggagcgcatcatcgagctgcaccgcgacaagcgc
ggcctggccgagggcattctggcggggcaggaggaggccaccgtgctggacgcggcggcg
ctctcggcgctcttgatggacagcgactag
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