Paucibacter sediminis: PFX98_10080
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Entry
PFX98_10080 CDS
T10150
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pais Paucibacter sediminis
Pathway
pais03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFX98_10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pais03400
]
PFX98_10080
Enzymes [BR:
pais01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PFX98_10080
DNA repair and recombination proteins [BR:
pais03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFX98_10080
Prokaryotic type
PFX98_10080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WIT13950
UniProt:
A0AA95NES8
LinkDB
All DBs
Position
2209735..2210442
Genome browser
AA seq
235 aa
AA seq
DB search
MASLTDALRGATLDAGWQAPLDAWLASPAGRDVLAHLQAREAAGATIYPPDPLRALRLTP
LAQVRVVILGQDPYHGPGQAEGLAFSVPDGNKLPPSLRNIFKELQRDLGQPPPMSAHLGP
WAAQGVLLLNTCLTVEDGAPASHAKIGKAGGWEALTDALIRAAAADPAPKVFMLWGAHAQ
AKAPLIAAAGPAQLVLTANHPSPLSATRPPAPFIGCGHFSEAAAWLAARGRHIAW
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctgaccgacgcgctgcgcggcgccacgctggatgccggctggcaggcgccg
ctggacgcctggctggcgagccccgccggccgcgatgtgctggcgcatctgcaggcccgt
gaggcggccggcgccaccatctacccgcccgatccgctgcgcgcgctgcgccttacgccg
ctcgcccaggtgcgcgtcgtgatcctcggccaggacccttatcacggcccgggtcaggcc
gagggcctggccttctcggtgcccgatggcaacaagctgccgcccagcctgcgcaatatc
ttcaaggagctgcagcgcgatctggggcagcctccgcccatgagcgcccacctcgggccc
tgggccgcgcagggcgtgctcttgctcaacacctgcctgacggtggaagacggcgcgccc
gccagccacgccaagatcggcaaggcaggcggctgggaggcgctgaccgacgcgctgata
cgcgccgcggccgccgaccccgcgcccaaggtcttcatgctctggggcgcccatgcccag
gccaaggcgcccttgatcgccgcggccggcccggcgcagctggtcctcacggccaaccat
ccctcgccgctgtcggccacccggcccccagcgccctttatcggctgcgggcatttttcc
gaggcggcggcctggctggcggcgcggggccggcacatcgcctggtag
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