Paucibacter sediminis: PFX98_10875
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Entry
PFX98_10875 CDS
T10150
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pais Paucibacter sediminis
Pathway
pais00300
Lysine biosynthesis
pais00470
D-Amino acid metabolism
pais01100
Metabolic pathways
pais01110
Biosynthesis of secondary metabolites
pais01120
Microbial metabolism in diverse environments
pais01230
Biosynthesis of amino acids
Module
pais_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFX98_10875 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFX98_10875 (dapF)
Enzymes [BR:
pais01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFX98_10875 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
PuhC
Motif
Other DBs
NCBI-ProteinID:
WIT14098
UniProt:
A0AA95NI51
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Position
2356498..2357364
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AA seq
288 aa
AA seq
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MNVHFTKMQGAGNDFAVIDATRAPLALNRTQLQRLGDRRFGVGCDQILVIEASPAAGVDF
RYRIFNGSSGEEVEHCGNGARCFVRYVVDKGLTAKRSIRVQTVNKLLELHLQDDGRVTVD
MGAPIFTLADLPFVAAGLQPRLQQGFELWRLALPSGPCEVAVLSMGNPHAVQFVADVDAA
PVLRVGPEVEHDAHFPRRVNAGFVQIISRSEIKLRVYERSAGETLACGTGACAAVVAGIR
LGLLDEAVEVHARGGDLKIEWAGRSAGLDAPVRMTGPAQTVFEGEIEL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcatttcaccaagatgcagggtgccggcaacgacttcgccgtcatcgatgcc
acccgcgccccgctggccctcaaccgcacccagctgcaacgcctgggcgatcgccgcttc
ggcgtcggctgcgaccagatcctggtgatcgaggccagcccggccgcgggcgtcgacttc
cgctaccgcatcttcaacggcagcagtggcgaagaggtggagcattgcggcaatggcgcg
cgctgcttcgtgcgctatgtggtcgacaagggcctcacagccaagcgcagcatccgcgtg
cagaccgtcaacaagctgctcgaactgcatctgcaggacgacggccgcgtcaccgtggac
atgggcgcgcccatcttcacgctggccgacctgcccttcgtggccgcgggtttgcagccg
cgcctgcagcagggcttcgagctctggcggctggcgttgccctccggcccctgcgaggtg
gcggtgctgtcgatgggcaacccgcatgcggtgcagttcgtggccgatgtcgatgcggcc
ccggtgctgcgcgtcgggcccgaggtcgagcatgacgcgcatttcccgcgccgtgtgaat
gccggtttcgtgcagatcatcagccgcagcgagatcaagctgcgcgtctacgagcgcagc
gccggcgagaccctggcctgcggcaccggcgcctgcgccgcggtggtggcgggcatacgc
ctggggctgctggacgaggccgtcgaggtgcatgcgcgcggcggcgatttgaagattgaa
tgggccggccgttcggcgggcctggacgcaccggtgcgcatgacgggcccggcgcaaacc
gtgtttgaaggagagatcgagctgtga
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