Paucibacter sediminis: PFX98_11515
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Entry
PFX98_11515 CDS
T10150
Name
(GenBank) CysB family HTH-type transcriptional regulator
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pais03000
]
PFX98_11515
Transcription factors [BR:
pais03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFX98_11515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
PBP_like_2
HTH_24
MarR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WIT14215
UniProt:
A0AA95NHI3
LinkDB
All DBs
Position
complement(2477621..2478565)
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AA seq
314 aa
AA seq
DB search
MNFQQLRSVREAQRRDFNLTEVANALHTSQPGVSRQIRELEDELGIEIFVRAGKRLTGLT
EPGRQVLPIVERLLHEADNLRRAGDDFARAGSGTLRIAATHSQARYALPPVVRDFRAAHP
DVLLHMQQGSPQQVARLLLDGDADVGIATEALAQYDELVALPCYRWTHTVLVPPEHALAR
ESAEGQALTLERLAQFPIITYESGYTGRSHIDDAFRAAGLELNVVLVAMDADVIKTYVEL
GLGVGIVAAIAYDEERDKQLHPIDGRHLFADNMTRLAVRKDAYLRDYVYAFISTFAAPLT
RATVAEARLGLLAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttccagcaattgcgatccgtccgcgaagcccagcgccgcgacttcaatctcacc
gaggtggccaacgccctgcatacctcgcagcccggcgtgagccgccagatccgcgaactg
gaggacgagctgggcatcgagatcttcgtgcgcgccggcaagcgtctcaccgggctcacc
gagccgggccgccaggtgctgcccatcgtcgagcgcctgctgcacgaggccgacaacctg
cggcgcgccggcgacgacttcgcccgcgccggcagcggcacgctgcgcatcgccgccacc
cacagccaggcacgctatgcgctgccgccggtggtgcgcgacttccgcgccgcccacccc
gacgtgctgctgcacatgcagcagggctcgccgcagcaggtggcgcgcctgctgctggac
ggcgatgccgatgtgggcatcgccaccgaggcgctggcccagtacgacgagctggtggcc
ctgccctgctaccgctggacccacaccgtgctggtaccgcccgagcatgcgctggcgcgc
gaatcggccgagggtcaggccttgacgctggagcggttggcccagttccccatcatcacc
tacgagagcggctataccggccgctcgcacatcgacgacgccttccgcgccgccgggctg
gaactgaacgtggtgctggtggccatggatgccgacgtcatcaagacctatgtggagctg
ggcctgggcgtgggcatcgtggccgccatcgcctacgacgaggagcgcgacaagcagctg
catccgatcgacggccgccatctgttcgccgacaacatgacgcggctggcggtgcgcaag
gacgcctatctgcgcgactacgtctacgccttcatctccaccttcgccgcgccgctgacg
cgcgcgaccgtggccgaggccaggctgggcctgctggcggcctga
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