Paucibacter sediminis: PFX98_13075
Help
Entry
PFX98_13075 CDS
T10150
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pais Paucibacter sediminis
Pathway
pais02024
Quorum sensing
pais03060
Protein export
pais03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PFX98_13075 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFX98_13075 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFX98_13075 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pais02044
]
PFX98_13075 (ffh)
Enzymes [BR:
pais01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PFX98_13075 (ffh)
Secretion system [BR:
pais02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PFX98_13075 (ffh)
Eukaryotic Sec-SRP protein
PFX98_13075 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
AAA_30
AAA_16
cobW
AAA_26
APS_kinase
AAA_19
AAA_33
AAA_24
AAA_31
Helicase_RecD
nSTAND3
ABC_tran
AAA_14
ResIII
YqeC
Rad17
Thymidylate_kin
GTP_EFTU
DO-GTPase1
AAA_18
6PF2K
SRPRB
TsaE
KTI12
Motif
Other DBs
NCBI-ProteinID:
WIT09869
UniProt:
A0AA95NCW0
LinkDB
All DBs
Position
complement(2813571..2814956)
Genome browser
AA seq
461 aa
AA seq
DB search
MASTLTDRLSLLVKTMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKAL
GAEVVGSLSPGQALVGIVHKELAATMGEGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
TKHLIEKRKKKVLTVSADVYRPAAIEQLKTVTAQAGGEWFASSPDQKPREIALAALDYAK
KHYFDVLLVDTAGRLAIDEALMAEIKELHATLNPVETLFVVDAMQGQDAINTARAFKEAL
PLTGVILTKLDGDSRGGAALSVRQVTGAPIKFAGVSEKIDGLEVFDGERHAGRVLGMGDI
VALVEEVSKGVDLAAAEKLAGKLKSGSGFDLNDFLAQISSMKKMGGLSSLMDKLPTQMAA
KAGQADMDRAERDMKRMEGILNAMTAKERRQPALLMDGKSKASRKRRIAAGAGVQIQDVN
RLLNQFDQMQGMMKKMSGGGLMKMMKKMGGMKGLKGMGGMG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccctgaccgaccgcctgagcctgctcgtgaaaacgatgcgcggccaggcc
cgcatcaccgaaagcaatgtgcaggacatgctgcgcgaagtgcgcatggccctgctggag
gccgacgtggccctgccggtggtgcgcgacttcatcgcgcgggtgaaggaaaaagccctg
ggcgccgaggtggtgggctcgctctcccccggccaggccctggtgggcatcgtgcacaag
gagcttgccgccaccatgggcgagggcgtcagcgacatcaacctggcggcccagccgccg
gcggtgatcctgatggccggcctgcagggggcgggcaagaccaccaccaccgccaagctc
accaagcacctgatcgagaagcgcaagaaaaaggtgctgacggtctcggccgacgtctac
cgccccgccgccatcgagcagctcaagaccgtcaccgcccaggccggaggcgaatggttc
gcctcctcacccgaccaaaagccgcgcgagatcgcgctggcggcgctggactacgccaag
aagcattacttcgacgtgctgctggtcgacaccgccggccgcctggcgatcgatgaggcc
ttgatggccgagatcaaggagctgcacgccacgctcaacccggtcgagaccctgttcgtg
gtggacgccatgcagggtcaggatgcgatcaacaccgccagggccttcaaggaggccttg
ccgctcaccggcgtgatcctcaccaagctggatggcgactcgcgcggcggggccgcactc
tcggtgcgtcaggtcaccggcgcgccgatcaagtttgccggcgtgtctgaaaagatcgat
gggctggaggtgttcgacggcgagcgccatgccggccgcgtgctgggcatgggcgacatc
gtggccctggtggaagaggtcagcaagggcgtggacctggcggcggccgagaagctggcc
ggcaagctcaagagcggcagcggtttcgacctcaacgacttcctcgcgcagatctcgtcg
atgaagaagatgggcggcctctccagcctgatggacaagctgcctacgcaaatggctgcc
aaggcgggtcaggccgacatggaccgcgccgagcgagacatgaagcgcatggaaggcatc
ctgaatgccatgacggccaaggagcgccgccaacccgccctgttgatggacggtaagagc
aaggccagccgcaagcgccgcatcgccgccggcgccggcgtacagatccaggacgtcaac
cgcctgctgaatcagttcgaccagatgcagggcatgatgaagaagatgagcggcggcggc
ctgatgaagatgatgaagaagatgggcgggatgaaggggctcaagggcatgggaggcatg
ggctga
DBGET
integrated database retrieval system
