Paucibacter sediminis: PFX98_13095
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Entry
PFX98_13095 CDS
T10150
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pais Paucibacter sediminis
Pathway
pais02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFX98_13095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pais02022
]
PFX98_13095
02035 Bacterial motility proteins [BR:
pais02035
]
PFX98_13095
Two-component system [BR:
pais02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PFX98_13095
Bacterial motility proteins [BR:
pais02035
]
Pilus system
Twitching motility proteins
PFX98_13095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
HTH_50
AAA_7
Torsin
Peripla_BP_4
AIRS
Bac_DnaA
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
WIT09873
UniProt:
A0AA95ND37
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Position
2817962..2819527
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AA seq
521 aa
AA seq
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MSTAAPAFSLLVVDDEPDLRTLYELTLLREGYELDTAGSVEDGLARLKARRYSAVITDMR
LPDGSGLDILRWLEQQGRQEKTLVITAYGSAENAVEALKAGAYDYLTKPVDLRQFRMVVA
SALGRMPASLPSVVPSQLPSEAATQEPTLPTPRAPAPLPRKAAPSAQALADTRAATALDR
LVGDSLAMQQVRALIEKVARSMAPVLLHGESGTGKELVARAIHDVSARSAQPFIAVNCGA
IPEQLLEAEFFGYRKGAFTGASEDREGFFQAANGGTLFLDEIGDLPLAMQSKLLRALQER
SVRPVGAVVEAPVNVRLLSATHKDLALEVGAGRFRQDLYYRLNVIQIRVPPLRERIEDLR
PISERVLTRIAQDAGVTPVPVLTAAALAQLARYAFPGNVRELENLLHRALALSGGERIDA
DDLGLPESLLDDAEFTPSELGGLPGEANTVVAPGGAEQPLPSDLAAYLDEVERGILIRAL
EQHRNNRTAAGASMGLSLRQMRYRMARLHITVGESDGSEGL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcagcacccgcattcagccttctggtcgtcgacgatgagcccgatctgcgc
acgctttacgagctgaccctgctgcgcgagggttatgagctggacaccgcgggcagcgtc
gaagacggcctggcgcgactgaaggccaggcgctacagcgccgtcatcaccgatatgcgc
ctgcccgatggcagcggcctggacatcctgcgctggctggagcagcagggccgccaggag
aagacgctggtgatcactgcctatggctcggccgagaacgcggtggaggcgctcaaggcc
ggcgcctacgactaccttaccaagccggtggacctgcgccagttccgcatggtggtggcc
tcggcactggggcgcatgccggccagcctgccctcggtcgtgccctcgcagctgccctcc
gaggcggccacccaggagccgaccctgccgacgccgcgcgcgccggcgccgctgccccgc
aaggcggcgcccagtgcccaggcgctggccgacacgcgcgcggccaccgccctggatcgt
ttggtgggcgactcgctggcgatgcagcaggtgcgcgcgctgatcgagaaggtggcgcgc
agcatggcgccggtgctgctgcacggcgagtcgggcaccggcaaggagctggtggcgcgc
gccatccacgatgtcagcgcgcgttcggcccagcccttcatcgcggtgaactgcggcgcc
attcccgagcaattgctggaggccgagttcttcggctatcgcaagggcgccttcaccggc
gccagcgaagaccgcgagggcttcttccaggcggccaatggcggcaccctgttcctggat
gaaatcggcgacctgccgcttgccatgcagtccaagctgctgcgtgcgctgcaggagcgc
tcggtgcggccggtgggggcggtggtggaggcgccggtgaatgtgcgcctgctcagcgcc
acccacaaggatctggcgctggaggtgggggcggggcgcttccggcaggacttgtattac
cggctgaacgtgatccagattcgcgtgccgccgctgcgcgagcgcatcgaggatctgcgc
cccatcagcgagcgcgtgctgacgcgcattgcccaggatgccggggtgacgccggtgccg
gtgctcaccgcggcggcgctggcgcagttggcgcgctatgccttcccgggcaatgtgcgc
gaactcgagaacctgctgcaccgcgccctggcgctctcaggcggcgagcgcatcgacgcc
gacgacctcggcctgcccgagtcgctgctggacgatgccgagttcacgcccagcgagctg
ggcggcctgcccggcgaggcgaacaccgtggtggcgcccggcggtgccgagcagcccctg
cccagcgatctggcggcctatctggacgaagtggagcgcggcatcctgatacgggcgctg
gagcagcaccgcaacaaccgcaccgccgcaggcgccagcatgggcttgtcgctgcgacag
atgcgctaccgcatggcgcgtctgcacatcaccgtgggtgagagtgatggcagcgagggg
ctctga
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