Paucibacter sediminis: PFX98_13445
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Entry
PFX98_13445 CDS
T10150
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pais Paucibacter sediminis
Brite
KEGG Orthology (KO) [BR:
pais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pais03021
]
PFX98_13445 (rpoH)
Transcription machinery [BR:
pais03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFX98_13445 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WIT09940
UniProt:
A0AA95N9N8
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All DBs
Position
complement(2898416..2899342)
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AA seq
308 aa
AA seq
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MSMMSNATALQVRDPWALLPSLGNLDAYISAVNRLPLLTPEEEQSFSRRLREHGDLEAAG
RLVLSHLRLVVSISRQYMGYGLPQGDLIQEGNVGLMKAVKRYDPDQGVRLVSYAMHWIKA
EIHEYILRNWRMVKVATTKAQRKLFFNLRSMKHSLKEDAAEGQTHRNTLTEAQVDHVARE
LNVKREEVLEMETRMAGGDVALEPQTDDDGESFAPIAYLADDSQEPTRVLESRSRDALAG
DGISRALAVLDERSRRIVEERWLKVNDDSSGGMTLHDLAAEYGVSAERIRQIEVAAMKKM
RKALAETA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgatgtccaacgccactgcactgcaagtacgcgacccctgggcgctgctgccc
tcgctgggcaatctggatgcctatatcagcgccgtcaaccgcctgcccctgttgaccccc
gaggaggagcagtccttctcgcgccgcctgcgcgagcatggcgatctggaagccgccggc
cggctggtgctctcgcacctgcgcctggtggtgtcgatctcgcgccagtacatgggttac
ggcctgccccagggcgacctgatccaggagggcaatgtgggcctgatgaaggccgtcaag
cgctacgaccccgaccagggcgtgcgcttggtgtcctacgccatgcactggatcaaggcc
gagatccacgagtacatcctgcgcaactggcgcatggtcaaggtggccaccaccaaggca
cagcgcaagctgttcttcaatctgcgctcgatgaagcacagcctgaaggaagacgccgcc
gagggccagacgcaccgcaacacgctcaccgaagcccaggtggaccatgtggcccgcgag
ctcaacgtcaagcgcgaggaagtgctggagatggagacccgcatggcgggtggcgacgtg
gccctggagccccagaccgatgacgacggcgagagcttcgcccccatcgcctacctggcc
gacgacagccaggagccgacgcgcgtgctggaaagccgctcgcgcgacgcgctggccggt
gacggcatttcgcgcgccctggcggtgctggacgagcgcagccgtcgcatcgtcgaagag
cgctggctcaaggtcaacgacgacagcagcggcggcatgaccctgcatgacctggcggcc
gaatacggcgtcagcgccgagcgcatccgccagatcgaggtggcggcaatgaagaagatg
cgcaaggccctggccgaaacggcctga
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